RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SLC7A8Q9UHI5 535 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 MOSPD1Q9UJG1 213 aa10.2□□□□□ -0.78
COL5A1-202ENST00000371820 TDRD6O60522 2096 aaKnown RBP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 A0A087X1B8 175 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 A0A088AWK7 358 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 A0A096LPK6 155 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 LY6G6EA0A0G2JKS1 128 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 PRSS38A1L453 326 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 DPPA5A6NC42 116 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 TMEM202A6NGA9 273 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 H0YJX3 145 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 TK2O00142 265 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 KCNK1O00180 336 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 ATXN7O15265 892 aaPredicted RBP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 HDAC3O15379 428 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 ZW10O43264 779 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 NPHS1O60500 1241 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 STAMBPO95630 424 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 BAG2O95816 211 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 JCHAINP01591 159 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 PDHA1P08559 390 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 COX4I1P13073 169 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 NCF2P19878 526 aaPredicted RBP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 LHCGRP22888 699 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 PSMB4P28070 264 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 CPOXP36551 454 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 ETV3P41162 512 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 GPR1P46091 355 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 RPL14P50914 215 aaKnown RBP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 CDK3Q00526 305 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 STX5Q13190 355 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 MSLNQ13421 630 aaPredicted RBP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 PCLAFQ15004 111 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 CDCP2Q5VXM1 449 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 LRRC66Q68CR7 880 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 GUSBP11Q6P575 273 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 SLC30A9Q6PML9 568 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 KIAA0408Q6ZU52 694 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 Q6ZVL8 140 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 HSD11B1LQ7Z5J1 315 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 TAF8Q7Z7C8 310 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 TREML1Q86YW5 311 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 C10orf107Q8IVU9 208 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 SLC35F3Q8IY50 421 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 LSMEM2Q8N112 164 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 CBARPQ8N350 705 aaPredicted RBP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 MPP5Q8N3R9 675 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 CNTD1Q8N815 330 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 ICA1LQ8NDH6 482 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 LPCAT1Q8NF37 534 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 ARRDC2Q8TBH0 407 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 WDR60Q8WVS4 1066 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 OR1E3Q8WZA6 343 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 ZNF669Q96BR6 464 aaPredicted RBP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 AP2M1Q96CW1 435 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 TSPAN17Q96FV3 270 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 PDXPQ96GD0 296 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 TEKT5Q96M29 485 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 FCRL3Q96P31 734 aaPredicted RBP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 PANX3Q96QZ0 392 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 LYSMD1Q96S90 227 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 LGMNQ99538 433 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 FAM167BQ9BTA0 163 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 MLPHQ9BV36 600 aaPredicted RBP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 KIFC1Q9BW19 673 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 GSDMCQ9BYG8 508 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 C12orf65Q9H3J6 166 aaKnown RBP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 RHOJQ9H4E5 214 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 CYP4F12Q9HCS2 524 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 FGF22Q9HCT0 170 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 OXSMQ9NWU1 459 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 PKD2L2Q9NZM6 624 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 ARMCX1Q9P291 453 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 GULP1Q9UBP9 304 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 PADI4Q9UM07 663 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 GPR34Q9UPC5 381 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 ACOT9Q9Y305 439 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 PCDHB1Q9Y5F3 818 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 U3KQA8 63 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 LRP4O75096 1905 aa10.19□□□□□ -0.78
COL5A1-202ENST00000371820 HELZ2Q9BYK8 2649 aaKnown RBP10.19□□□□□ -0.78
COL5A1-202ENST00000371820 BPTFQ12830 3046 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 ENO4A6NNW6 628 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 TMX2-CTNND1H3BSU7 103 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 CASQ2O14958 399 aaPredicted RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 CSO75390 466 aaKnown RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 C1QL1O75973 258 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 C2P06681 752 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 UQCRBP14927 111 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 PTPN3P26045 913 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 SLC26A3P40879 764 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 CD86P42081 329 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 STC1P52823 247 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 MTTPP55157 894 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 SESN3P58005 492 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 DNAJB13P59910 316 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 TLE3Q04726 772 aa10.18□□□□□ -0.78
COL5A1-202ENST00000371820 GALNT1Q10472 559 aaPredicted RBP10.18□□□□□ -0.78
COL5A1-202ENST00000371820 ILF3Q12906 894 aaKnown RBP eCLIP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms