RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 TP53INP1Q96A56 240 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 AURKBQ96GD4 344 aaPredicted RBP16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 POLR2J3Q9H1A7 115 aaKnown RBP16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 DSN1Q9H410 356 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 SLC2A6Q9UGQ3 507 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 MYOCOSA0A1B0GUC4 107 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 YES1P07947 543 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 CD247P20963 164 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 PNLIPRP1P54315 467 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 UFM1P61960 85 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 LSAMPQ13449 338 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 TGFBIQ15582 683 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 CMPK2Q5EBM0 449 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 PGBD2Q6P3X8 592 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 CHST15Q7LFX5 561 aaPredicted RBP16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 CYP2U1Q7Z449 544 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 GPSM3Q9Y4H4 160 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 KIF1AQ12756 1690 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 OR2AG2A6NM03 316 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 ATF6P18850 670 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 OLIG2Q13516 323 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 MYLK3Q32MK0 819 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 ZNF404Q494X3 552 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 TUBA3EQ6PEY2 450 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 TNFAIP8L1Q8WVP5 186 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 B3GALT6Q96L58 329 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 C1QTNF1Q9BXJ1 281 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 GPR88Q9GZN0 384 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 FAM83DQ9H4H8 585 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 NCKAP1Q9Y2A7 1128 aa16.83■□□□□ 0.28
PTP4A1-201ENST00000370651 MYH8P13535 1937 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 RBM47A0AV96 593 aaKnown RBP16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 S100A6P06703 90 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 PRPS1L1P21108 318 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 LARS2Q15031 903 aaKnown RBP16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 RTL4Q6ZR62 310 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 LGI4Q8N135 537 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 PEBP4Q96S96 227 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 PAK6Q9NQU5 681 aaPredicted RBP16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 ZNF510Q9Y2H8 683 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 CLIC1O00299 241 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 SULT2A1Q06520 285 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 DNASE1L3Q13609 305 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 PAFAH1B3Q15102 231 aaKnown RBP16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 SPATS1Q496A3 300 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 KAT2AQ92830 837 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 KCNC2Q96PR1 638 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 SPIN1Q9Y657 262 aaPredicted RBP16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 KAT6AQ92794 2004 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 REM1O75628 298 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 NSG1P42857 185 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 LAPTM5Q13571 262 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 C2orf73Q8N5S3 287 aaPredicted RBP16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 SLC35F5Q8WV83 523 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 RERGQ96A58 199 aaPredicted RBP16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 CLIP3Q96DZ5 547 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 SLC35C2Q9NQQ7 365 aa16.82■□□□□ 0.28
PTP4A1-201ENST00000370651 RIIAD1A6NNX1 92 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 PENKP01210 267 aaPredicted RBP16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 ZNF24P17028 368 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 DCDC1P59894 354 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 FAM171BQ6P995 826 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 CDKN2AIPNLQ96HQ2 116 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 TXLNGYQ9BZA5 131 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 TMLHEQ9NVH6 421 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 OR6C70A6NIJ9 312 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 SLC6A4P31645 630 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 NFKB2Q00653 900 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 TARDBPQ13148 414 aaKnown RBP eCLIP16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 PIM3Q86V86 326 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 OR8H3Q8N146 312 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 TRPM4Q8TD43 1214 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 SNX33Q8WV41 574 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 ZNF641Q96N77 438 aaPredicted RBP16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 MTERF1Q99551 399 aaKnown RBP16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 OSBPL2Q9H1P3 480 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 FBRSL1Q9HCM7 1045 aaKnown RBP16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 PTPRJQ12913 1337 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 A0A1W2PQ67 120 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 ZNF879B4DU55 563 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 TSPAN4O14817 238 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 GRM6O15303 877 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 GABRR2P28476 465 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 ARSFP54793 590 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 RFTN1Q14699 578 aaPredicted RBP16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 MPPE1Q53F39 396 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 ZNF517Q6ZMY9 492 aaPredicted RBP16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 MOB2Q70IA6 237 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 MKS1Q9NXB0 559 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 GTF2IRD1Q9UHL9 959 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 IKZF2Q9UKS7 526 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 HSPB3Q12988 150 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 PTGES3Q15185 160 aaKnown RBP16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 WSCD2Q2TBF2 565 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 TMEM27Q9HBJ8 222 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 SPEF1Q9Y4P9 236 aa16.81■□□□□ 0.28
PTP4A1-201ENST00000370651 GTPBP1O00178 669 aaKnown RBP16.8■□□□□ 0.28
PTP4A1-201ENST00000370651 PEX10O60683 326 aa16.8■□□□□ 0.28
PTP4A1-201ENST00000370651 RNASEH2AO75792 299 aaKnown RBP16.8■□□□□ 0.28
PTP4A1-201ENST00000370651 CSTF2P33240 577 aaKnown RBP eCLIP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms