RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 PPP3R1P63098 170 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 RPP38P78345 283 aaKnown RBP8.4□□□□□ -1.06
ABCA4-201ENST00000370225 NFKB2Q00653 900 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 SLC1A5Q15758 541 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 COLEC12Q5KU26 742 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 TMEM126BQ8IUX1 230 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 OR2L3Q8NG85 312 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 SPOCK2Q92563 424 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 TAF4O00268 1085 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 NOL4O94818 638 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 JMJD7P0C870 316 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 C8orf89P0DMQ9 161 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 NR4A1P22736 598 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 TNFRSF8P28908 595 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 RAB25P57735 213 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 MTPNP58546 118 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 SLBPQ14493 270 aaKnown RBP eCLIP8.4□□□□□ -1.06
ABCA4-201ENST00000370225 CHRNA6Q15825 494 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 CLEC12AQ5QGZ9 265 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 RBM44Q6ZP01 1051 aaKnown RBP8.4□□□□□ -1.06
ABCA4-201ENST00000370225 SLC29A4Q7RTT9 530 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 AMIGO1Q86WK6 493 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 TMEM156Q8N614 296 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 KBTBD8Q8NFY9 601 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.4□□□□□ -1.06
ABCA4-201ENST00000370225 PCBD2Q9H0N5 130 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 SDCBP2Q9H190 292 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 TBC1D17Q9HA65 648 aa8.4□□□□□ -1.06
ABCA4-201ENST00000370225 ALPPP05187 535 aa8.4□□□□□ -1.07
ABCA4-201ENST00000370225 KLK1P06870 262 aa8.4□□□□□ -1.07
ABCA4-201ENST00000370225 SLC11A1P49279 550 aa8.4□□□□□ -1.07
ABCA4-201ENST00000370225 FUT2Q10981 343 aa8.4□□□□□ -1.07
ABCA4-201ENST00000370225 CCSAPQ6IQ19 270 aaPredicted RBP8.4□□□□□ -1.07
ABCA4-201ENST00000370225 HOPXQ9BPY8 73 aaPredicted RBP8.4□□□□□ -1.07
ABCA4-201ENST00000370225 ELOA3DA6NLF2 546 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ZNF726A6NNF4 738 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 EIF1AYO14602 144 aaKnown RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 NOBOXO60393 691 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 UGT2B11O75310 529 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 TULP3O75386 442 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 GBAP04062 536 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ASLP04424 464 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 PRKAR1AP10644 381 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 KHKP50053 298 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ADARP55265 1226 aaKnown RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 TXNL4AP83876 142 aaKnown RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 LCP2Q13094 533 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ELOA3BQ3SY89 546 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 FAM174BQ3ZCQ3 159 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 SIRPB2Q5JXA9 342 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 C12orf76Q8N812 135 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 RASGEF1AQ8N9B8 481 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ELOA3Q8NG57 546 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 RMI1Q9H9A7 625 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ATRNO75882 1429 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 BBIP1A8MTZ0 92 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 MTRF1O75570 445 aaKnown RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 SNUPNO95149 360 aaKnown RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 CYB5AP00167 134 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 LINGO3P0C6S8 592 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ETS2P15036 469 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 PTGER3P43115 390 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 GHRHRQ02643 423 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 QPCTQ16769 361 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 C1orf94Q6P1W5 598 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 B3GNT6Q6ZMB0 384 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 WFIKKN2Q8TEU8 576 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 TNFRSF25Q93038 417 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 IFT46Q9NQC8 304 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 TDP1Q9NUW8 608 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 MOCS1Q9NZB8 636 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 AP4B1Q9Y6B7 739 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 MYOCOSA0A1B0GUC4 107 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ARHGEF33A8MVX0 844 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 LOC110117498-PIK3R3F6TDL0 507 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ERI3O43414 337 aaKnown RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 PCDH7O60245 1069 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 CHRNB2P17787 502 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ACVR2AP27037 513 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 KLF10Q13118 480 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 AHSA2Q719I0 299 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 TMCO2Q7Z6W1 182 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 CLNKQ7Z7G1 428 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ZNF611Q8N823 705 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 PLA2G15Q8NCC3 412 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 MTMR14Q8NCE2 650 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 FAM156AQ8NDB6 213 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 BPIFB1Q8TDL5 484 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ZNF296Q8WUU4 475 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 MIPEPQ99797 713 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 SGIP1Q9BQI5 828 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 MINDY3Q9H8M7 445 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 RNPEPL1Q9HAU8 725 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 PNPLA8Q9NP80 782 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 EDDM13A0A1B0GTR0 161 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 TLX3O43711 291 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ZNF432O94892 652 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 KLF8O95600 359 aaPredicted RBP8.39□□□□□ -1.07
ABCA4-201ENST00000370225 CBLP22681 906 aa8.39□□□□□ -1.07
ABCA4-201ENST00000370225 ACADLP28330 430 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms