RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 TRIM64A6NGJ6 449 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 HPCAP84074 193 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 CMTM8Q8IZV2 173 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 OR2AP1Q8NGE2 309 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 FAM162AQ96A26 154 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 ACPTQ9BZG2 426 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 IFT80Q9P2H3 777 aaPredicted RBP17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 CD84Q9UIB8 345 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 SH3BP1Q9Y3L3 701 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 ANKRD33BA6NCL7 494 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 PRKD3O94806 890 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 LATS1O95835 1130 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 CST1P01037 141 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 PDYNP01213 254 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 ANXA5P08758 320 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 EPORP19235 508 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 SHMT2P34897 504 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 ALDH3A2P51648 485 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 MAPK10P53779 464 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 B4GALNT1Q00973 533 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 DAG1Q14118 895 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 RAB39AQ14964 217 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 ADAMTS16Q8TE57 1224 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 EZH1Q92800 747 aaPredicted RBP17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 NCLNQ969V3 563 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 TSSK3Q96PN8 268 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 BEGAINQ9BUH8 593 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 NAA50Q9GZZ1 169 aaKnown RBP17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 C1orf109Q9NX04 203 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 LSM7Q9UK45 103 aaKnown RBP17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 PDE10AQ9Y233 779 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 CLDN9O95484 217 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 ALPLP05186 524 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 URODP06132 367 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 POLR2IP36954 125 aaKnown RBP17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 MAD2L1Q13257 205 aaPredicted RBP17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 TTLL9Q3SXZ7 439 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 GPR33Q49SQ1 333 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 LRRC23Q53EV4 343 aaPredicted RBP17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 GPR180Q86V85 440 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 ZDHHC13Q8IUH4 622 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 GFM2Q969S9 779 aaKnown RBP17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 PCDHB14Q9Y5E9 798 aa17.69■□□□□ 0.42
UBQLN4-201ENST00000368309 ELOVL7A1L3X0 281 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 G3V2T6 193 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 GNGT2O14610 69 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 MTX2O75431 263 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 LRATO95237 230 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 IL6P05231 212 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 NSG1P42857 185 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 PTSQ03393 145 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 SELENOMQ8WWX9 145 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 ZNF558Q96NG5 402 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 COPS8Q99627 209 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 UGT2B28Q9BY64 529 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 ING2Q9H160 280 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 CLMPQ9H6B4 373 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 PARVBQ9HBI1 364 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 HPS4Q9NQG7 708 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 ABCB8Q9NUT2 735 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 KIAA1522Q9P206 1035 aaPredicted RBP17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 TEX28O15482 410 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 SOCS5O75159 536 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 ATE1O95260 518 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 CXCL10P02778 98 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 THRBP10828 461 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 PRKACGP22612 351 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 LHCGRP22888 699 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 USP39Q53GS9 565 aaKnown RBP17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 CCNYL2Q5T2Q4 361 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 LYPLAL1Q5VWZ2 237 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 TMEM26Q6ZUK4 368 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 MYLIPQ8WY64 445 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 GORASP2Q9H8Y8 452 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 FAM8A1Q9UBU6 413 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 TRPS1Q9UHF7 1281 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 CXCR6O00574 342 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 TACR1P25103 407 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 UBE2R2Q712K3 238 aaPredicted RBP17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 TCEAL8Q8IYN2 117 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 SLC39A11Q8N1S5 342 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 VOPP1Q96AW1 172 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 SLC47A1Q96FL8 570 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 DEFB118Q96PH6 123 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 TOR3AQ9H497 397 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 KCTD5Q9NXV2 234 aa17.68■□□□□ 0.42
UBQLN4-201ENST00000368309 NUP214P35658 2090 aaPredicted RBP17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 UPK3BL1B0FP48 263 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 UPK3BL2E5RIL1 263 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 SRCP12931 536 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 RUNDC3AQ59EK9 446 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 NECAB2Q7Z6G3 386 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 VRK3Q8IV63 474 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 RNF175Q8N4F7 328 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 SGCDQ92629 289 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 USP7Q93009 1102 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 HHIPL1Q96JK4 782 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 EGLN2Q96KS0 407 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 INPP5KQ9BT40 448 aa17.67■□□□□ 0.42
UBQLN4-201ENST00000368309 ADNPQ9H2P0 1102 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms