RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 RPAP2Q8IXW5 612 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 L3MBTL4Q8NA19 623 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 HJURPQ8NCD3 748 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 PPFIBP2Q8ND30 876 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 OR52B6Q8NGF0 335 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 SPPL2AQ8TCT8 520 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 NOC3LQ8WTT2 800 aaKnown RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 IL22RA2Q969J5 263 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 EXOC4Q96A65 974 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 CNRIP1Q96F85 164 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 SLC41A2Q96JW4 573 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 HARBI1Q96MB7 349 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 NECTIN4Q96NY8 510 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 SERINC2Q96SA4 455 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 OLFM1Q99784 485 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 SEMA3CQ99985 751 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 PAXXQ9BUH6 204 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 SARGQ9BW04 601 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 NYXQ9GZU5 481 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 CTDSP1Q9GZU7 261 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 ISG20L2Q9H9L3 353 aaKnown RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 ACKR4Q9NPB9 350 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 STK39Q9UEW8 545 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 RCE1Q9Y256 329 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 RIPK3Q9Y572 518 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 CEP83Q9Y592 693 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 PIAS3Q9Y6X2 628 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 RP1L1Q8IWN7 2480 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF541Q9H0D2 1346 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 ARHGAP23Q9P227 1491 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 TNRQ92752 1358 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 IGLV2-18A0A075B6J9 118 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 IQCMA0A1B0GVH7 501 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 MED19A0JLT2 244 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 EIF4E1BA6NMX2 242 aaKnown RBP-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 A8MX80 341 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 TMCC2O75069 709 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 WISP2O76076 250 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 KBTBD11O94819 623 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 TGDSO95455 350 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 ACSL3O95573 720 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZBED1O96006 694 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 CPN1P15169 458 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 CA4P22748 312 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 SHMT1P34896 483 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 SERPINF1P36955 418 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 RXRGP48443 463 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 ARSEP51690 589 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 NEK2P51955 445 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 DCDC1P59894 354 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 DHODHQ02127 395 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 GRIK3Q13003 919 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 PLA2G7Q13093 441 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 TDGQ13569 410 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 PPP2R5BQ15173 497 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 RAB30Q15771 203 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 GRAMD1BQ3KR37 738 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 KRTAP21-1Q3LI58 79 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 ARL13BQ3SXY8 428 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 RAB6CQ53S08 254 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF506Q5JVG8 444 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 SH2D4BQ5SQS7 431 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 TTC22Q5TAA0 569 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF658Q5TYW1 1059 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 OTPQ5XKR4 325 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 JADE1Q6IE81 842 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF544Q6NX49 715 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 CCDC174Q6PII3 467 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 PLPPR4Q7Z2D5 763 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 CRYBG2Q8N1P7 616 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 ARRDC1Q8N5I2 433 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 EMC1Q8N766 993 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF433Q8N7K0 673 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 AVL9Q8NBF6 648 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM156AQ8NDB6 213 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 OR13C3Q8NGS6 347 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 PCNPQ8WW12 178 aaKnown RBP-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 RAB40AQ8WXH6 277 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 CNOT9Q92600 299 aaKnown RBP-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 C3orf49Q96BT1 292 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 GCC1Q96CN9 775 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 HDAC11Q96DB2 347 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 SGK494Q96LW2 274 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 C10orf90Q96M02 699 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 FOPNLQ96NB1 174 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 PCGF1Q9BSM1 259 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 RTKNQ9BST9 563 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 RAB6CQ9H0N0 254 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 CPVLQ9H3G5 476 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 MARCH7Q9H992 704 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 DACT1Q9NYF0 836 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 KIAA1456Q9P272 454 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 CD207Q9UJ71 328 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 RFNGQ9Y644 331 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 AUP1Q9Y679 476 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 MEGF6O75095 1541 aa-0.14□□□□□ -2.43
RNU6-54P-201ENST00000365563 KIF26AQ9ULI4 1882 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-54P-201ENST00000365563 IGHV3-16A0A0C4DH30 117 aa-0.15□□□□□ -2.43
RNU6-54P-201ENST00000365563 IGHV3-38A0A0C4DH36 116 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms