RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 LBHQ53QV2 105 aaPredicted RBP2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 MDH1BQ5I0G3 518 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 SIRPB2Q5JXA9 342 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 NDUFAF5Q5TEU4 345 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 GFI1BQ5VTD9 330 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 WBP2NLQ6ICG8 309 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 MFSD6Q6ZSS7 791 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 C9orf139Q6ZV77 190 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 NUP54Q7Z3B4 507 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 SLC9B2Q86UD5 537 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 NFE4Q86UQ8 179 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 SFR1Q86XK3 245 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 PLD3Q8IV08 490 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 GPALPP1Q8IXQ4 340 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 THNSL1Q8IYQ7 743 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 MAPKAPK5-AS1Q8N8E1 139 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 TRIM58Q8NG06 486 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 ZNF473Q8WTR7 871 aaKnown RBP2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 HSD17B8Q92506 261 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 EXT2Q93063 718 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 MR1Q95460 341 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 SPSB1Q96BD6 273 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 ZNF653Q96CK0 615 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 ALG14Q96F25 216 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 SENP5Q96HI0 755 aaPredicted RBP2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 IGSF21Q96ID5 467 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 SPATA33Q96N06 139 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 POLR3CQ9BUI4 534 aaPredicted RBP2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 TUBB2BQ9BVA1 445 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 C6orf106Q9H6K1 298 aaPredicted RBP2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 FKRPQ9H9S5 495 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 LMAN1LQ9HAT1 526 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 APOBEC3GQ9HC16 384 aaKnown RBP2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 DNAJB9Q9UBS3 223 aa2.22□□□□□ -2.05
RNU4-56P-201ENST00000364700 IGLV5-45A0A087WSX0 123 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 PLSCR5A0PG75 271 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 HYKKA2RU49 373 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 C5orf52A6NGY3 159 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 ANXA2P2A6NMY6 339 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 C15orf62A8K5M9 175 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 PSMD14O00487 310 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 CLDN4O14493 209 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 GAPDHSO14556 408 aaPredicted RBP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 XPNPEP2O43895 674 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 SYNCRIPO60506 623 aaKnown RBP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 ATP6AP2O75787 350 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 GAS8-AS1O95177 125 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 NADKO95544 446 aaPredicted RBP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 RPN1P04843 607 aaKnown RBP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 H1F0P07305 194 aaKnown RBP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 EPCAMP16422 314 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 GJA1P17302 382 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 MSH3P20585 1137 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 CDC25CP30307 473 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 TLX1P31314 330 aaPredicted RBP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 SLC6A6P31641 620 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 PCGF2P35227 344 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 KRT2P35908 639 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 GNL1P36915 607 aaPredicted RBP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 NR2C2P49116 596 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 ASCL1P50553 236 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 MLLT10P55197 1068 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 UBASH3AP57075 661 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 PTENP60484 403 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 CX3CL1P78423 397 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 PSMD6Q15008 389 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 KRTAP24-1Q3LI83 254 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 UGT3A2Q3SY77 523 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 FAM76BQ5HYJ3 339 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 CCNYL2Q5T2Q4 361 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 SPSB3Q6PJ21 355 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 MEX3BQ6ZN04 569 aaKnown RBP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 FAM47EQ6ZV65 393 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 MARK2Q7KZI7 788 aaKnown RBP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 ANKRD33Q7Z3H0 272 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 GALNTL5Q7Z4T8 443 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 LONP2Q86WA8 852 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 FAM114A1Q8IWE2 563 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 CCAR2Q8N163 923 aaKnown RBP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 ANKRD13CQ8N6S4 541 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 SLC24A4Q8NFF2 622 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 PPP4R1Q8TF05 950 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 SSMEM1Q8WWF3 244 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 FCAMRQ8WWV6 532 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 DNASE2BQ8WZ79 361 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 IRGQQ8WZA9 623 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 MRPS27Q92552 414 aaKnown RBP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 RAD9AQ99638 391 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 ADPGKQ9BRR6 497 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 FNDC11Q9BVV2 318 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 LAT2Q9GZY6 243 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 TCF7L2Q9NQB0 619 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 ZFP57Q9NU63 452 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 NOTCH3Q9UM47 2321 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 PADI2Q9Y2J8 665 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 TRIM17Q9Y577 477 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 PCDHGB1Q9Y5G3 927 aa2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.21□□□□□ -2.06
RNU4-56P-201ENST00000364700 MED19A0JLT2 244 aaPredicted RBP2.2□□□□□ -2.06
RNU4-56P-201ENST00000364700 CASTOR2A6NHX0 329 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms