RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CDV3Q9UKY7 258 aaKnown RBP13.64□□□□□ -0.23
COL6A1-201ENST00000361866 BCORQ6W2J9 1755 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 LRP5O75197 1615 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 TPST2O60704 377 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 MTX2O75431 263 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 CLDN11O75508 207 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 KCNE1P15382 129 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 EDNRBP24530 442 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 FEN1P39748 380 aaKnown RBP13.64□□□□□ -0.23
COL6A1-201ENST00000361866 PTGER3P43115 390 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 FAM189BP81408 668 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 PLET1Q6UQ28 207 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 SCAIQ8N9R8 606 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 UXS1Q8NBZ7 420 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 ABHD11Q8NFV4 315 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 FRS2Q8WU20 508 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 NPLQ9BXD5 320 aaPredicted RBP13.64□□□□□ -0.23
COL6A1-201ENST00000361866 BRD9Q9H8M2 597 aa13.64□□□□□ -0.23
COL6A1-201ENST00000361866 CNOT11Q9UKZ1 510 aaKnown RBP13.64□□□□□ -0.23
COL6A1-201ENST00000361866 ARID1BQ8NFD5 2236 aaPredicted RBP13.64□□□□□ -0.23
COL6A1-201ENST00000361866 MAGEB17A8MXT2 336 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 CLIC1O00299 241 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 ACSL4O60488 711 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 LRG1P02750 347 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 ANXA4P09525 319 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-201ENST00000361866 AGXTP21549 392 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 PPP2R1BP30154 601 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 GSTM5P46439 218 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 RAB15P59190 212 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 RAB14P61106 215 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 SMARCB1Q12824 385 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 GANABQ14697 944 aaKnown RBP13.63□□□□□ -0.23
COL6A1-201ENST00000361866 VARS2Q5ST30 1063 aaKnown RBP13.63□□□□□ -0.23
COL6A1-201ENST00000361866 USP45Q70EL2 814 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 ARMC8Q8IUR7 673 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 FLCNQ8NFG4 579 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 EMILIN2Q9BXX0 1053 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 ATP13A3Q9H7F0 1226 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 COL4A1P02462 1669 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 ECM29Q5VYK3 1845 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 ACOX1Q15067 660 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 QPRTQ15274 297 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 CCL14Q16627 93 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 OR2T5Q6IEZ7 315 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 TMEM53Q6P2H8 277 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 RANBP10Q6VN20 620 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 ADGRG5Q8IZF4 528 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 OR2T29Q8NH02 315 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 SPRTNQ9H040 489 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-201ENST00000361866 C11orf16Q9NQ32 467 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 SLC25A13Q9UJS0 675 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 SSR3Q9UNL2 185 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 DDX60LQ5H9U9 1706 aaKnown RBP13.63□□□□□ -0.23
COL6A1-201ENST00000361866 RBM47A0AV96 593 aaKnown RBP13.63□□□□□ -0.23
COL6A1-201ENST00000361866 MITFO75030 526 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-201ENST00000361866 AFF1P51825 1210 aaKnown RBP13.63□□□□□ -0.23
COL6A1-201ENST00000361866 TMBIM6P55061 237 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 CACNG1Q06432 222 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 CD47Q08722 323 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 GTDC1Q4AE62 458 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 MS4A13Q5J8X5 152 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 ANKS3Q6ZW76 656 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 GOLGA7Q7Z5G4 137 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 TMPRSS11BQ86T26 416 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 TMEM203Q969S6 136 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 ZNF347Q96SE7 839 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 NLNQ9BYT8 704 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 SGK2Q9HBY8 427 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 TMEM181Q9P2C4 612 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 WDR37Q9Y2I8 494 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 PCDHB1Q9Y5F3 818 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 C8BP07358 591 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 ALDOCP09972 364 aaKnown RBP13.63□□□□□ -0.23
COL6A1-201ENST00000361866 PSMA1P25786 263 aaKnown RBP13.63□□□□□ -0.23
COL6A1-201ENST00000361866 PLA2G16P53816 162 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 NFKB2Q00653 900 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 FOXM1Q08050 763 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 C18orf21Q32NC0 220 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-201ENST00000361866 TPRG1LQ5T0D9 272 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 FAM219BQ5XKK7 198 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 TMPRSS11AQ6ZMR5 421 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 LYSMD3Q7Z3D4 306 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 RAB43Q86YS6 212 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 PSD4Q8NDX1 1056 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 ART5Q96L15 291 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 STARD7Q9NQZ5 370 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 KCNE2Q9Y6J6 123 aa13.63□□□□□ -0.23
COL6A1-201ENST00000361866 PABPC1P11940 636 aaKnown RBP13.62□□□□□ -0.23
COL6A1-201ENST00000361866 RXRGP48443 463 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 ELAVL2Q12926 359 aaKnown RBP13.62□□□□□ -0.23
COL6A1-201ENST00000361866 GRM2Q14416 872 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 TAF1AQ15573 450 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-201ENST00000361866 CYP27C1Q4G0S4 372 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 TSGA13Q96PP4 275 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 TLR6Q9Y2C9 796 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 ACTL7AQ9Y615 435 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 FAM240BA0A1B0GVZ2 78 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 SAGE2PA6NJ88 616 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 ZBTB42B2RXF5 422 aa13.62□□□□□ -0.23
COL6A1-201ENST00000361866 ACOT8O14734 319 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms