RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 POM121BA6NF01 834 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 OR7A17O14581 309 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 SKAP2O75563 359 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 CRCPO75575 148 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 C1orf105O95561 183 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 OTCP00480 354 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 UROSP10746 265 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 ACADLP28330 430 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 EPHA3P29320 983 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 SLC6A12P48065 614 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 METRNLQ641Q3 311 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 KIAA0895LQ68EN5 471 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 UNC5DQ6UXZ4 953 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 PDZD3Q86UT5 571 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 CHCHD4Q8N4Q1 142 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 ACTRT2Q8TDY3 377 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 CLDN23Q96B33 292 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 CHRDQ9H2X0 955 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 IPPKQ9H8X2 491 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 KLC4Q9NSK0 619 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 WSB2Q9NYS7 404 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 TRIM33Q9UPN9 1127 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 DNAJC15Q9Y5T4 150 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 HS3ST3A1Q9Y663 406 aa20.46■□□□□ 0.87
MAP1LC3A-201ENST00000360668 GOLGA8QA0A0J9YX86 632 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 A0A1B0GTL3 188 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 GOLGA8OA6NCC3 632 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 GOLGA8NF8WBI6 632 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 TOR1BO14657 336 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 FUCA1P04066 466 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 NQO1P15559 274 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 EPB42P16452 691 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 CALB2P22676 271 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 KELP23276 732 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 PRDX3P30048 256 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 CD6P30203 668 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 NUDT1P36639 197 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 GDF5P43026 501 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 BDKRB1P46663 353 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 FOXA1P55317 472 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 NFATC4Q14934 902 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 LSM12Q3MHD2 195 aaKnown RBP20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 GALNT13Q8IUC8 556 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 HOMEZQ8IX15 550 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 SPEM1Q8N4L4 309 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 OR52B6Q8NGF0 335 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 PRR11Q96HE9 360 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 BMFQ96LC9 184 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 C6orf106Q9H6K1 298 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 TM7SF3Q9NS93 570 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 ACSL5Q9ULC5 683 aa20.45■□□□□ 0.86
MAP1LC3A-201ENST00000360668 FAM86C2PA6NEL3 165 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 CAPN14A8MX76 684 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 KATNA1O75449 491 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 RASSF9O75901 435 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 APBB3O95704 486 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 IGHV4-34P06331 123 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 PTPN4P29074 926 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 CCNG1P51959 295 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 CLDN2P57739 230 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 ERVPABLB-1P60509 514 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 PFN3P60673 137 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 YPEL5P62699 121 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 TRAF3Q13114 568 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 PYCR3Q53H96 274 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 KLHDC8AQ8IYD2 350 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 PJA1Q8NG27 643 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 CEP70Q8NHQ1 597 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 TWIST2Q8WVJ9 160 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 EDAQ92838 391 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 ATP6V1E2Q96A05 226 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 C19orf60Q96EN9 201 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 PTCD3Q96EY7 689 aaKnown RBP20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 PPP1R36Q96LQ0 422 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 KCNA7Q96RP8 456 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 ZDHHC5Q9C0B5 715 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 SUFUQ9UMX1 484 aa20.44■□□□□ 0.86
MAP1LC3A-201ENST00000360668 E9PBE3 544 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 KLHL41O60662 606 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 CHEK2O96017 543 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 ENO1P06733 434 aaKnown RBP20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 RPS9P46781 194 aaKnown RBP20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 ZXDCQ2QGD7 858 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 PTCHD3Q3KNS1 767 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 GCNT7Q6ZNI0 430 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 TMEM145Q8NBT3 493 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 MAGEC3Q8TD91 643 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 SLC7A6OSQ96CW6 309 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 RAB3IPQ96QF0 476 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 PKP4Q99569 1192 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 LRFN3Q9BTN0 628 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 NTMT1Q9BV86 223 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 CCDC106Q9BWC9 280 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 RASSF4Q9H2L5 321 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 SLC40A1Q9NP59 571 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 DMTF1Q9Y222 760 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 ST14Q9Y5Y6 855 aa20.43■□□□□ 0.86
MAP1LC3A-201ENST00000360668 PRAMEF26H0Y7S4 382 aa20.42■□□□□ 0.86
MAP1LC3A-201ENST00000360668 OR4F21O95013 312 aa20.42■□□□□ 0.86
MAP1LC3A-201ENST00000360668 HTR1BP28222 390 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms