RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 KPNA3O00505 521 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 ATG13O75143 517 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 MTX2O75431 263 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 GSTM1P09488 218 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 ITGB7P26010 798 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 VARSP26640 1264 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 GSTM4Q03013 218 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 AASDHQ4L235 1098 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 SYTL3Q4VX76 610 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 FNDC3BQ53EP0 1204 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 FAM78AQ5JUQ0 283 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 CYP2U1Q7Z449 544 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 ADGRD2Q7Z7M1 963 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 PTRH1Q86Y79 214 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 HID1Q8IV36 788 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 C12orf76Q8N812 135 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 L3MBTL4Q8NA19 623 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 DNAJB14Q8TBM8 379 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 GLMNQ92990 594 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 FBXL8Q96CD0 374 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 ASB16Q96NS5 453 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 HBEGFQ99075 208 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 MYCBPQ99417 103 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 ALG2Q9H553 416 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 ACTL8Q9H568 366 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 CXorf56Q9H5V9 222 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 C1orf109Q9NX04 203 aa17.87■□□□□ 0.45
PDLIM7-203ENST00000359895 TCF20Q9UGU0 1960 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 SERTM1A2A2V5 107 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 DENRO43583 198 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 SEC22BO75396 215 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 ATP6V1B2P21281 511 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 MAP4P27816 1152 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 GRIA3P42263 894 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 PRLHRP49683 370 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 GSK3BP49841 420 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 CREB5Q02930 508 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 PDGFRLQ15198 375 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 DUSP6Q16828 381 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 HNRNPA1L2Q32P51 320 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 PTCHD3Q3KNS1 767 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 TMC5Q6UXY8 1006 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 ZNF765Q7L2R6 523 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 NPAS3Q8IXF0 933 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 RGL4Q8IZJ4 473 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 ATL1Q8WXF7 558 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 TMEM159Q96B96 161 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 SLCO4A1Q96BD0 722 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 DTD2Q96FN9 168 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 COQ10AQ96MF6 247 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 KCTD14Q9BQ13 255 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 CCM2Q9BSQ5 444 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 EPHX3Q9H6B9 360 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 CCM2LQ9NUG4 571 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 THG1LQ9NWX6 298 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 PDP2Q9P2J9 529 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 SNX13Q9Y5W8 968 aa17.86■□□□□ 0.45
PDLIM7-203ENST00000359895 KANSL1LA0AUZ9 987 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 OR2AG2A6NM03 316 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 HNRNPRO43390 633 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 LYNP07948 512 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 EPORP19235 508 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 PRPH2P23942 346 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 FSHRP23945 695 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 CASP2P42575 452 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 FOLH1Q04609 750 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 LIPEQ05469 1076 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 ZNF33BQ06732 778 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 PWP1Q13610 501 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 HABP4Q5JVS0 413 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 NANOGP8Q6NSW7 305 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 ZNF366Q8N895 744 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 NXPE3Q969Y0 559 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 PPP1R16AQ96I34 528 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 SLC45A3Q96JT2 553 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 P2RY13Q9BPV8 354 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 DPY30Q9C005 99 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 NANOGQ9H9S0 305 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 FARSBQ9NSD9 589 aaKnown RBP17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 DLGAP2Q9P1A6 1054 aa17.85■□□□□ 0.45
PDLIM7-203ENST00000359895 RANBP2P49792 3224 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 KCNE1BA0A087WTH5 132 aa17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 EIF4E1BA6NMX2 242 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 ZNF839A8K0R7 811 aa17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 PRRT4C9JH25 899 aa17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 NPIPB8E9PQR5 432 aa17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 ARPC2O15144 300 aa17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 UGDHO60701 494 aa17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 PSIP1O75475 530 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 RSL1D1O76021 490 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 GPIP06744 558 aa17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 PIM1P11309 404 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 IL10P22301 178 aa17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 PSMA4P25789 261 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 HTR1EP28566 365 aa17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 SLC6A11P48066 632 aa17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 TMEM115Q12893 351 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 CPSF6Q16630 551 aaKnown RBP eCLIP17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 GAB4Q2WGN9 574 aa17.84■□□□□ 0.45
PDLIM7-203ENST00000359895 POM121L1PQ3SYA9 428 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms