RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 COL27A1Q8IZC6 1860 aaPredicted RBP23.6■■□□□ 1.37
ALKAL1-201ENST00000358543 HYAL3O43820 417 aaPredicted RBP23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 WISP3O95389 354 aaPredicted RBP23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 CATP04040 527 aaKnown RBP23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 HOXB3P14651 431 aaPredicted RBP23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 STMN1P16949 149 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 CCKBRP32239 447 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 CSF2RBP32927 897 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 SHMT2P34897 504 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 MSH2P43246 934 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 SERPINB9P50453 376 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 PDX1P52945 283 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 CLDN6P56747 220 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 ZKSCAN8Q15776 578 aaPredicted RBP23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 PIWIL4Q7Z3Z4 852 aaKnown RBP23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 AMIGO1Q86WK6 493 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 SPNS2Q8IVW8 549 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 MYO1HQ8N1T3 1032 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 UHMK1Q8TAS1 419 aaKnown RBP23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 JPH3Q8WXH2 748 aaPredicted RBP23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 ANKRD7Q92527 254 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 RSC1A1Q92681 617 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 MRRFQ96E11 262 aaKnown RBP23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 LINGO1Q96FE5 620 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 PAFAH2Q99487 392 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 GPAMQ9HCL2 828 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 HRASLS2Q9NWW9 162 aa23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 RUVBL2Q9Y230 463 aaKnown RBP23.59■■□□□ 1.37
ALKAL1-201ENST00000358543 EXOC1LA0A1B0GW35 172 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 OR5K3A6NET4 321 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 SLC16A5O15375 505 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 ZBTB14O43829 449 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 C9P02748 559 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 PPM1FP49593 454 aaPredicted RBP23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 PGGT1BP53609 377 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 RAB10P61026 200 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 TARDBPQ13148 414 aaKnown RBP eCLIP23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 TRA2AQ13595 282 aaKnown RBP eCLIP23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 UAP1Q16222 522 aaPredicted RBP23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 OOSP2Q86WS3 158 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 CNPY4Q8N129 248 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 CAVIN3Q969G5 261 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 DHRS4Q9BTZ2 278 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 MENTQ9BUN1 341 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 TWSG1Q9GZX9 223 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 CAB39LQ9H9S4 337 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 OR6C2Q9NZP2 312 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 TSR3Q9UJK0 312 aaKnown RBP23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 ICKQ9UPZ9 632 aa23.58■■□□□ 1.37
ALKAL1-201ENST00000358543 MN1Q10571 1320 aaPredicted RBP23.58■■□□□ 1.36
ALKAL1-201ENST00000358543 IGHV5-10-1A0A0J9YXX1 117 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 HMX2A2RU54 273 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 POC1B-GALNT4F8VUJ3 575 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 MATN2O00339 956 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 CSO75390 466 aaKnown RBP23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 C8GP07360 202 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 CNTFP26441 200 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 CRABP2P29373 138 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 RAB28P51157 221 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 INHBCP55103 352 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 SP140Q13342 867 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 DCAKDQ8WVC6 231 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 UBLCP1Q8WVY7 318 aaPredicted RBP23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 ZDHHC12Q96GR4 267 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 CCDC77Q9BR77 488 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 RAB11FIP5Q9BXF6 653 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 SLC12A9Q9BXP2 914 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 ENTPD2Q9Y5L3 495 aa23.57■■□□□ 1.36
ALKAL1-201ENST00000358543 OR6C74A6NCV1 312 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 ARHGEF33A8MVX0 844 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 MYO1CO00159 1063 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 RASGRF2O14827 1237 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 TOX3O15405 576 aaPredicted RBP23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 CAPN5O15484 640 aaPredicted RBP23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 KRT38O76015 456 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 TOP3BO95985 862 aaKnown RBP23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 THRAP10827 490 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 BDKRB1P46663 353 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 PRKAA1Q13131 559 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 ZNF460Q14592 562 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 MROH9Q5TGP6 573 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 ADGRD1Q6QNK2 874 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 TAOK1Q7L7X3 1001 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 CCDC91Q7Z6B0 441 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 B3GNT8Q7Z7M8 397 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 ADGRF3Q8IZF5 1079 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 RAB42Q8N4Z0 105 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 ZMYND15Q9H091 742 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 SEMA6CQ9H3T2 930 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 XKR8Q9H6D3 395 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 TMEM9Q9P0T7 183 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 NEUROG3Q9Y4Z2 214 aa23.56■■□□□ 1.36
ALKAL1-201ENST00000358543 FAM149AA5PLN7 773 aa23.55■■□□□ 1.36
ALKAL1-201ENST00000358543 BTN3A3O00478 584 aa23.55■■□□□ 1.36
ALKAL1-201ENST00000358543 MAP4P27816 1152 aaKnown RBP23.55■■□□□ 1.36
ALKAL1-201ENST00000358543 GCAP28676 217 aa23.55■■□□□ 1.36
ALKAL1-201ENST00000358543 PKLRP30613 574 aa23.55■■□□□ 1.36
ALKAL1-201ENST00000358543 CSRP3P50461 194 aa23.55■■□□□ 1.36
ALKAL1-201ENST00000358543 SHC2P98077 582 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms