RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 FOSL1P15407 271 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 PBX1P40424 430 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 CLCN4P51793 760 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 SLC18A1P54219 525 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 SEMA5AQ13591 1074 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 ZNF423Q2M1K9 1284 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 GPR158Q5T848 1215 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 TMEM214Q6NUQ4 689 aaKnown RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 MED27Q6P2C8 311 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 CIR1Q86X95 450 aaPredicted RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 RASGEF1AQ8N9B8 481 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 ELMO3Q96BJ8 720 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 HSPA12BQ96MM6 686 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 LGMNQ99538 433 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 TAPBPLQ9BX59 468 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 BPIFA1Q9NP55 256 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 RABL2AQ9UBK7 228 aaPredicted RBP12.64□□□□□ -0.39
SMC4-202ENST00000357388 MALT1Q9UDY8 824 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 RABL2BQ9UNT1 228 aa12.64□□□□□ -0.39
SMC4-202ENST00000357388 KLHL33A6NCF5 533 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 DISC1C4P0D8 188 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 SLC33A1O00400 549 aaPredicted RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 EI24O14681 340 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 PLD2O14939 933 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 HOXC8P31273 242 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 PSMA6P60900 246 aaKnown RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 MRPS5P82675 430 aaKnown RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 GNA12Q03113 381 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 ZNF267Q14586 743 aaPredicted RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 TEX44Q53QW1 395 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 BANPQ8N9N5 519 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 DCAKDQ8WVC6 231 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 KLHL6Q8WZ60 621 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 KAT2AQ92830 837 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 COL21A1Q96P44 957 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 ZSCAN5AQ9BUG6 496 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 FANCFQ9NPI8 374 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 LYARQ9NX58 379 aaKnown RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 CNTN6Q9UQ52 1028 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 B8ZZF3 427 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 TLX3O43711 291 aaPredicted RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 RENP00797 406 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 HK1P19367 917 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 CD52P31358 61 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 GRM5P41594 1212 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 RPL6Q02878 288 aaKnown RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 ILF3Q12906 894 aaKnown RBP eCLIP12.63□□□□□ -0.398e-14■■■■■ 40.3
SMC4-202ENST00000357388 GTF2H2Q13888 395 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 GTF2H2CQ6P1K8 395 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 RFWD3Q6PCD5 774 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 FAM43BQ6ZT52 329 aaPredicted RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 SYVN1Q86TM6 617 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 PHOX2BQ99453 314 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 GBA3Q9H227 469 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 ELAC1Q9H777 363 aaKnown RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 IPPKQ9H8X2 491 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 EIF2B3Q9NR50 452 aaKnown RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 TVP23BQ9NYZ1 205 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 IQGAP3Q86VI3 1631 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 SLITRK5O94991 958 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 RYKP34925 604 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 GRK6P43250 576 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 TAS2R43P59537 309 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 TUSC3Q13454 348 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 TLR1Q15399 786 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 PLEKHN1Q494U1 663 aaPredicted RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 PLPP4Q5VZY2 271 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 UBQLNLQ8IYU4 475 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 PNLDC1Q8NA58 520 aaKnown RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 OR2L8Q8NGY9 312 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 GDAP2Q9NXN4 497 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 SLC39A1Q9NY26 324 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 CYTH4Q9UIA0 394 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 AP2A1O95782 977 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 ADRB2P07550 413 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 ACVR2AP27037 513 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 TMBIM6P55061 237 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 RPA4Q13156 261 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 HEPACAMQ14CZ8 416 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 KCTD19Q17RG1 926 aaPredicted RBP12.63□□□□□ -0.39
SMC4-202ENST00000357388 PARP15Q460N3 678 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 RALGPS1Q5JS13 557 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 ZNF773Q6PK81 442 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 VSTM1Q6UX27 236 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 MARCH9Q86YJ5 346 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 OR10G2Q8NGC3 310 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 OR52J3Q8NH60 311 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 OR10A6Q8NH74 314 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 NR4A3Q92570 626 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 DUSP16Q9BY84 665 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 MAP4K5Q9Y4K4 846 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 COL1A2P08123 1366 aa12.63□□□□□ -0.39
SMC4-202ENST00000357388 A0A075B6Q4 140 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 BUD23O43709 281 aaKnown RBP12.62□□□□□ -0.39
SMC4-202ENST00000357388 ATG13O75143 517 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 SLC18A2Q05940 514 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 SLC25A52Q3SY17 297 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 CRY2Q49AN0 593 aa12.62□□□□□ -0.39
SMC4-202ENST00000357388 LIX1Q8N485 282 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms