RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 EPOP01588 193 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 FABP3P05413 133 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 ATXN1LP0C7T5 689 aaKnown RBP6.7□□□□□ -1.34
RTN4-203ENST00000357376 SOX6P35712 828 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 DGKEP52429 567 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 MED22Q15528 200 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 SPANXN2Q5MJ10 180 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 TTC23LQ6PF05 361 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 CERS6Q6ZMG9 384 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 EPHX4Q8IUS5 362 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 MFSD2AQ8NA29 543 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 KLHDC9Q8NEP7 349 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 S100ZQ8WXG8 99 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 KCNJ9Q92806 393 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 ITFG2Q969R8 447 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 ZNF419Q96HQ0 510 aaPredicted RBP6.7□□□□□ -1.34
RTN4-203ENST00000357376 FUNDC2Q9BWH2 189 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 NUAK2Q9H093 628 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 ARNT2Q9HBZ2 717 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 FNIP2Q9P278 1114 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 RAPGEFL1Q9UHV5 662 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 OAS3Q9Y6K5 1087 aaKnown RBP6.7□□□□□ -1.34
RTN4-203ENST00000357376 SSC5DA1L4H1 1573 aa6.7□□□□□ -1.34
RTN4-203ENST00000357376 TRIM43BA6NCK2 446 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 GLTPD2A6NH11 291 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 OR2AG2A6NM03 316 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 IFRD1O00458 451 aaPredicted RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 PQBP1O60828 265 aaKnown RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 MITFO75030 526 aaPredicted RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 UGT2B11O75310 529 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 INMTO95050 263 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CYP11A1P05108 521 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 ATP6V1E1P36543 226 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 NUDT6P53370 316 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 TPTEP56180 551 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 SPIBQ01892 262 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CHIT1Q13231 466 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CYP2A13Q16696 494 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 LDLRAD1Q5T700 205 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 RGL4Q8IZJ4 473 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 PDPRQ8NCN5 879 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 C8orf48Q96LL4 319 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 PSKH2Q96QS6 385 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 SMAD5Q99717 465 aaKnown RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 BOCQ9BWV1 1114 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 GPR62Q9BZJ7 368 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 ZNF385DQ9H6B1 395 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 POPDC3Q9HBV1 291 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 FAM118AQ9NWS6 357 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 TMEM9Q9P0T7 183 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 MTMR11A4FU01 709 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 SUV39H1O43463 412 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 KRT75O95678 551 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 TRBC1P01850 177 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 OPN1SWP03999 348 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 UGT2B4P06133 528 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CD36P16671 472 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 MATN1P21941 496 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 SHMT2P34897 504 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 ALDH3B2P48448 385 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CLCN2P51788 898 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CCL23P55773 120 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CD47Q08722 323 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CHRNA6Q15825 494 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 USP39Q53GS9 565 aaKnown RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 CYBRD1Q53TN4 286 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 XKR4Q5GH76 650 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 ANKRD26P1Q6NSI1 321 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 USP45Q70EL2 814 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 ELMOD1Q8N336 334 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 AMER2Q8N7J2 671 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 MDGA1Q8NFP4 955 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 OR2T11Q8NH01 316 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 HMGCLL1Q8TB92 370 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 PROKR1Q8TCW9 393 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CHCHD6Q9BRQ6 235 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 YTHDF1Q9BYJ9 559 aaKnown RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 LTB4R2Q9NPC1 389 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 MIEF1Q9NQG6 463 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 EHD3Q9NZN3 535 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 AP3M1Q9Y2T2 418 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 PCDHGA8Q9Y5G5 932 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 H0YAE9 185 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 CAPN15O75808 1086 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 RPS17P08708 135 aaKnown RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 MTHFD2P13995 350 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 POLR2IP36954 125 aaKnown RBP6.69□□□□□ -1.34
RTN4-203ENST00000357376 CSKP41240 450 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 BCAP31P51572 246 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 PLA2G16P53816 162 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 EPHB3P54753 998 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 INHBEP58166 350 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 FAM189BP81408 668 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 MTA1Q13330 715 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 ZNF284Q2VY69 593 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 ARMC4Q5T2S8 1044 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 DEPDC1Q5TB30 811 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 TBPL2Q6SJ96 375 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 SERINC5Q86VE9 423 aa6.69□□□□□ -1.34
RTN4-203ENST00000357376 DBF4BQ8NFT6 615 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms