RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 EPS8L3Q8TE67 593 aaKnown RBP15.12■□□□□ 0.01
TRIM13-201ENST00000356017 ANKRD49Q8WVL7 239 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 SLC12A9Q9BXP2 914 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 TRIM54Q9BYV2 358 aa15.12■□□□□ 0.01
TRIM13-201ENST00000356017 TDRKHQ9Y2W6 561 aaKnown RBP15.12■□□□□ 0.01
TRIM13-201ENST00000356017 IGHV1OR21-1A0A087WYE8 117 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 TLDC2A0PJX2 215 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 PABPN1LA6NDY0 278 aaKnown RBP15.11■□□□□ 0.01
TRIM13-201ENST00000356017 SMIM23A6NLE4 172 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 UBXN7O94888 489 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 ENO2P09104 434 aaPredicted RBP15.11■□□□□ 0.01
TRIM13-201ENST00000356017 HIST1H2AGP0C0S8 130 aaPredicted RBP15.11■□□□□ 0.01
TRIM13-201ENST00000356017 AMD1P17707 334 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 HIST1H2ADP20671 130 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 SHMT2P34897 504 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 MAGEA12P43365 314 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 OR1D5P58170 312 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 SQSTM1Q13501 440 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 FAM83EQ2M2I3 478 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 ZNF761Q86XN6 746 aaPredicted RBP15.11■□□□□ 0.01
TRIM13-201ENST00000356017 RASGRP3Q8IV61 690 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 OR52E1Q8NGJ3 308 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 HIST1H2AHQ96KK5 128 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 HIST1H2AJQ99878 128 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 H2AFJQ9BTM1 129 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 RAB11FIP5Q9BXF6 653 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 TBC1D10AQ9BXI6 508 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 PARVBQ9HBI1 364 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 NMRAL1Q9HBL8 299 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 TOR4AQ9NXH8 423 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 LNPEPQ9UIQ6 1025 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 PIEZO1Q92508 2521 aa15.11■□□□□ 0.01
TRIM13-201ENST00000356017 SPAARA0A1B0GVQ0 90 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 CCDC189A1A4V9 331 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 DCDC2BA2VCK2 349 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 ARHGEF33A8MVX0 844 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 B4GAT1O43505 415 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 DUX1O43812 170 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 LTA4HP09960 611 aaKnown RBP15.1■□□□□ 0.01
TRIM13-201ENST00000356017 FTH1P19P0C7X4 201 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 COL6A2P12110 1019 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 KRT15P19012 456 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 HSD17B2P37059 387 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 PPM1FP49593 454 aaPredicted RBP15.1■□□□□ 0.01
TRIM13-201ENST00000356017 CSHL1Q14406 222 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 KLC3Q6P597 504 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 ADAMTSL2Q86TH1 951 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 AMIGO1Q86WK6 493 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 OR4E2Q8NGC2 313 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 ACMSDQ8TDX5 336 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 DPYSL5Q9BPU6 564 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 VPS11Q9H270 941 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 LRRN3Q9H3W5 708 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 SRMSQ9H3Y6 488 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 EURLQ9NYK6 297 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 OR6C2Q9NZP2 312 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 CTNNAL1Q9UBT7 734 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 NOVA2Q9UNW9 492 aaKnown RBP15.1■□□□□ 0.01
TRIM13-201ENST00000356017 BTN3A1O00481 513 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 GIPC1O14908 333 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 OPA1O60313 960 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 DKK1O94907 266 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 CPNE6O95741 557 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 MT-ND3P03897 115 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 RPLP0P05388 317 aaKnown RBP15.1■□□□□ 0.01
TRIM13-201ENST00000356017 CD1DP15813 335 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 H2AFXP16104 143 aaPredicted RBP15.1■□□□□ 0.01
TRIM13-201ENST00000356017 CD1CP29017 333 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 BDKRB1P46663 353 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 RAB28P51157 221 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 AMZ1Q400G9 498 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 CCDC157Q569K6 752 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 PPM1JQ5JR12 505 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 LRIG3Q6UXM1 1119 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 LCA5Q86VQ0 697 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 OOSP2Q86WS3 158 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 OR9A1PQ8NGU1 263 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 TSNARE1Q96NA8 513 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 GFM1Q96RP9 751 aaKnown RBP15.1■□□□□ 0.01
TRIM13-201ENST00000356017 SPATA7Q9P0W8 599 aa15.1■□□□□ 0.01
TRIM13-201ENST00000356017 ZNF839A8K0R7 811 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 MYO1CO00159 1063 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 MATN2O00339 956 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 NTN3O00634 580 aaPredicted RBP15.09■□□□□ 0.01
TRIM13-201ENST00000356017 RFPL1O75677 317 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 KLHL2O95198 593 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 PROS1P07225 676 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 AP1S2P56377 157 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 CCL7P80098 99 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 ZNF844Q08AG5 666 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 PRKAA1Q13131 559 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 SPIDRQ14159 915 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 ARHGAP19Q14CB8 494 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 TSNAXIP1Q2TAA8 658 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 ARMC6Q6NXE6 501 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 WDR74Q6RFH5 385 aaPredicted RBP15.09■□□□□ 0.01
TRIM13-201ENST00000356017 SLCO6A1Q86UG4 719 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 PLXDC1Q8IUK5 500 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 SPNS2Q8IVW8 549 aa15.09■□□□□ 0.01
TRIM13-201ENST00000356017 SPATA6LQ8N4H0 392 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms