RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 SCIMPQ6UWF3 145 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 DCUN1D3Q8IWE4 304 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 SLC44A1Q8WWI5 657 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 TRNT1Q96Q11 434 aaKnown RBP11.07□□□□□ -0.64
FN1-204ENST00000356005 DLGAP2Q9P1A6 1054 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 TJP1Q07157 1748 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 PGRMC2O15173 223 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 GMFGO60234 142 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 ZNF8P17098 575 aaPredicted RBP11.07□□□□□ -0.64
FN1-204ENST00000356005 KCNJ5P48544 419 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 HSPB3Q12988 150 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 LY6G5CQ5SRR4 150 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 ARHGAP36Q6ZRI8 547 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 Q6ZVU0 165 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 LRP10Q7Z4F1 713 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 GDPD5Q8WTR4 605 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 CCNB1IP1Q9NPC3 277 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 A0A1W2PQ72 361 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 TRIM38O00635 465 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 LIN7AO14910 233 aaPredicted RBP11.07□□□□□ -0.64
FN1-204ENST00000356005 KCNJ13O60928 360 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 COX4I1P13073 169 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 JUPP14923 745 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 PIK3R6Q5UE93 754 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 C22orf39Q6P5X5 142 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 LRRC70Q7Z2Q7 622 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 POU5F2Q8N7G0 328 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 AMER2Q8N7J2 671 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 TWIST2Q8WVJ9 160 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 PMEPA1Q969W9 287 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 NKX2-4Q9H2Z4 354 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 CCSER2Q9H7U1 834 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 MOCS1Q9NZB8 636 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 KLRF1Q9NZS2 232 aa11.07□□□□□ -0.64
FN1-204ENST00000356005 GSC2O15499 205 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 GRID2O43424 1007 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 CER1O95813 267 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 GNALP38405 381 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 PSME3P61289 254 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 DECR1Q16698 335 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 KIAA0930Q6ICG6 404 aaPredicted RBP11.06□□□□□ -0.64
FN1-204ENST00000356005 ABRAXAS1Q6UWZ7 409 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 RNF31Q96EP0 1072 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 HHIPL1Q96JK4 782 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 ATG10Q9H0Y0 220 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 ZDHHC7Q9NXF8 308 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 PLLPQ9Y342 182 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 MAP4K5Q9Y4K4 846 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 PRODHO43272 600 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 NRP2O60462 931 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 SYNGR4O95473 234 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 PIK3CBP42338 1070 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 ZNF41P51814 821 aaPredicted RBP11.06□□□□□ -0.64
FN1-204ENST00000356005 JAM2P57087 298 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 IPCEF1Q8WWN9 437 aaPredicted RBP11.06□□□□□ -0.64
FN1-204ENST00000356005 C1orf74Q96LT6 269 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 ZNF347Q96SE7 839 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 PCM1Q15154 2024 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 C5AR1P21730 350 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 NTSR1P30989 418 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 CLCQ05315 142 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 AADACL2Q6P093 401 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 TTC27Q6P3X3 843 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 TMEM110Q86TL2 294 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 MR1Q95460 341 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 TSSK3Q96PN8 268 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 METTL7AQ9H8H3 244 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 SPHK2Q9NRA0 654 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.06□□□□□ -0.64
FN1-204ENST00000356005 CYP8B1Q9UNU6 501 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 BACE2Q9Y5Z0 518 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 RP1P56715 2156 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 HEPACAM2A8MVW5 462 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 SOX30O94993 753 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 OAS1P00973 400 aaKnown RBP11.06□□□□□ -0.64
FN1-204ENST00000356005 CXCR1P25024 350 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 PLA2G16P53816 162 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 SLC34A1Q06495 639 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 GBX1Q14549 363 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 SEMA3AQ14563 771 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 HM13Q8TCT9 377 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 TMEM209Q96SK2 561 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 MAP1BP46821 2468 aaKnown RBP11.06□□□□□ -0.64
FN1-204ENST00000356005 TDRD15B5MCY1 1934 aaKnown RBP11.06□□□□□ -0.64
FN1-204ENST00000356005 SMNDC1O75940 238 aaKnown RBP eCLIP11.06□□□□□ -0.643e-8■■■□□ 18.7
FN1-204ENST00000356005 AP2A2O94973 939 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 IFNW1P05000 195 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 LIMK2P53671 638 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 KIAA1161Q6NSJ0 714 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 ZNF483Q8TF39 744 aaPredicted RBP11.06□□□□□ -0.64
FN1-204ENST00000356005 HAVCR1Q96D42 359 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 HERC2P3Q9BVR0 1158 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 MCM8Q9UJA3 840 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 UGT2B11O75310 529 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 WBP4O75554 376 aaKnown RBP11.06□□□□□ -0.64
FN1-204ENST00000356005 NCBP2P52298 156 aaKnown RBP eCLIP11.06□□□□□ -0.64
FN1-204ENST00000356005 RING1Q06587 406 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 CPNE9Q8IYJ1 553 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 FAM13CQ8NE31 585 aa11.06□□□□□ -0.64
FN1-204ENST00000356005 TRIB2Q92519 343 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms