RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PHF10Q8WUB8 498 aaKnown RBP13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ZIC5Q96T25 663 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 TTYH2Q9BSA4 534 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 SMOC2Q9H3U7 446 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 KLHL31Q9H511 634 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 IPPKQ9H8X2 491 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 MAGEL2Q9UJ55 1249 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ADAM30Q9UKF2 790 aa13.82□□□□□ -0.2
SREBF1-202ENST00000355815 POLR2AP24928 1970 aaKnown RBP13.82□□□□□ -0.2
SREBF1-202ENST00000355815 ILVBLA1L0T0 632 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 ARPC2O15144 300 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 AOC2O75106 756 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 C9P02748 559 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 GPIP06744 558 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 PRKAG1P54619 331 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 TXNDC8Q6A555 127 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 ELMOD2Q8IZ81 293 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 C2orf73Q8N5S3 287 aaPredicted RBP13.81□□□□□ -0.2
SREBF1-202ENST00000355815 PDPRQ8NCN5 879 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 EEF1AKMT1Q8WVE0 214 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 PRICKLE1Q96MT3 831 aaPredicted RBP13.81□□□□□ -0.2
SREBF1-202ENST00000355815 C1orf21Q9H246 121 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 MCUBQ9NWR8 336 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 INSIG1O15503 277 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 BCAS2O75934 225 aaPredicted RBP13.81□□□□□ -0.2
SREBF1-202ENST00000355815 CD1EP15812 388 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 ABRQ12979 859 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 PTCHD4Q6ZW05 846 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 ANKS3Q6ZW76 656 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 MARVELD2Q8N4S9 558 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 GAB3Q8WWW8 586 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 UPF1Q92900 1129 aaKnown RBP eCLIP13.81□□□□□ -0.21e-9■■■■□ 19.9
SREBF1-202ENST00000355815 TMBIM1Q969X1 311 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 NEK6Q9HC98 313 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 TMEM138Q9NPI0 162 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 PTGFRNQ9P2B2 879 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 SSR3Q9UNL2 185 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 GRID2O43424 1007 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 PRDX6P30041 224 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 SLC5A2P31639 672 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 ARRB2P32121 409 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 ITGA1P56199 1179 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 SMARCB1Q12824 385 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 SNAPC1Q16533 368 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 MSANTD2Q6P1R3 559 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 PIH1D2Q8WWB5 315 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 TMEM203Q969S6 136 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 TP53INP1Q96A56 240 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 MOV10Q9HCE1 1003 aaKnown RBP13.81□□□□□ -0.2
SREBF1-202ENST00000355815 TBCCD1Q9NVR7 557 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 POLR3BQ9NW08 1133 aaPredicted RBP13.81□□□□□ -0.2
SREBF1-202ENST00000355815 C14orf119Q9NWQ9 140 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 FAM172BPA6NC97 362 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 KPNA3O00505 521 aaPredicted RBP13.81□□□□□ -0.2
SREBF1-202ENST00000355815 PRMT5O14744 637 aaPredicted RBP13.81□□□□□ -0.2
SREBF1-202ENST00000355815 PRAMEF1O95521 474 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 GPR180Q86V85 440 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 RBM4BQ9BQ04 359 aaKnown RBP13.81□□□□□ -0.2
SREBF1-202ENST00000355815 RBM4Q9BWF3 364 aaKnown RBP13.81□□□□□ -0.2
SREBF1-202ENST00000355815 OSBPL10Q9BXB5 764 aa13.81□□□□□ -0.2
SREBF1-202ENST00000355815 FAM126AQ9BYI3 521 aaPredicted RBP13.81□□□□□ -0.2
SREBF1-202ENST00000355815 IQCMA0A1B0GVH7 501 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 ECI2O75521 394 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 TFAP2AP05549 437 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 PSKH1P11801 424 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 PAICSP22234 425 aaKnown RBP13.8□□□□□ -0.2
SREBF1-202ENST00000355815 PARP15Q460N3 678 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 SMYD5Q6GMV2 418 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 SERINC5Q86VE9 423 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 C11orf24Q96F05 449 aaPredicted RBP13.8□□□□□ -0.2
SREBF1-202ENST00000355815 TSPAN18Q96SJ8 248 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 SLC29A1Q99808 456 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 CLN6Q9NWW5 311 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 COMMD3Q9UBI1 195 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 KIAA1217Q5T5P2 1943 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 TRIP11Q15643 1979 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 ANKRD33BA6NCL7 494 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 SAGE2PA6NJ88 616 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 SNTNA6NMZ2 147 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 OR10H3O60404 316 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 VPS4BO75351 444 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 CKBP12277 381 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 IMPDH1P20839 514 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 BMXP51813 675 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 YBEYP58557 167 aaPredicted RBP13.8□□□□□ -0.2
SREBF1-202ENST00000355815 IL10RBQ08334 325 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 LCP2Q13094 533 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 DAG1Q14118 895 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 USP41Q3LFD5 358 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 DPP10Q8N608 796 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF366Q8N895 744 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 CEP295NLQ96MC4 621 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 ACAT2Q9BWD1 397 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 ZNF717Q9BY31 904 aaPredicted RBP13.8□□□□□ -0.2
SREBF1-202ENST00000355815 CCNB1IP1Q9NPC3 277 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 TIGARQ9NQ88 270 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 TESMINQ9Y4I5 508 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 ANKRD31Q8N7Z5 1873 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 UPK3BL1B0FP48 263 aa13.8□□□□□ -0.2
SREBF1-202ENST00000355815 UPK3BL2E5RIL1 263 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms