RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 PLEKHG7Q6ZR37 379 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 RNF135Q8IUD6 432 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 KDM1BQ8NB78 822 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 OR2AP1Q8NGE2 309 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 VPS33AQ96AX1 596 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 LRCH3Q96II8 777 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 TCF12Q99081 682 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 RPP25Q9BUL9 199 aaKnown RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 CPEB1Q9BZB8 566 aaKnown RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 UNKQ9C0B0 810 aaKnown RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 RUBCNLQ9H714 662 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 RIMKLBQ9ULI2 386 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 WASH3PC4AMC7 463 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 PTGES3LE9PB15 166 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 NUAK1O60285 661 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 EPN2O95208 641 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 SLC4A1P02730 911 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 TGM1P22735 817 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 OPRD1P41143 372 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 MESP2Q0VG99 397 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 MADCAM1Q13477 382 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 NAB1Q13506 487 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 AQP6Q13520 282 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 NPTX1Q15818 432 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 PPM1JQ5JR12 505 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 GPR153Q6NV75 609 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 CHSY3Q70JA7 882 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 KDELC2Q7Z4H8 507 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 C10orf107Q8IVU9 208 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 CCDC28AQ8IWP9 274 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 KYQ8NBH2 561 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 PPHLN1Q8NEY8 458 aaKnown RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 ST13P5Q8NFI4 369 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 OR2T34Q8NGX1 318 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 ST8SIA2Q92186 375 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 PEX13Q92968 403 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 SDCCAG3Q96C92 435 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 MFSD3Q96ES6 412 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 ALOXE3Q9BYJ1 711 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 COG4Q9H9E3 785 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 WDR41Q9HAD4 459 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 RPRD1BQ9NQG5 326 aaKnown RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 HEATR9A2RTY3 570 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 CPNE3O75131 537 aaKnown RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 SOCS5O75159 536 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 IGSF6O95976 241 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 ICAM2P13598 275 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 NMBRP28336 390 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 UQCRC1P31930 480 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 GJA4P35212 333 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 RAB15P59190 212 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 RPL26P61254 145 aaKnown RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 SNRPD2P62316 118 aaKnown RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 ACVR1Q04771 509 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 POU6F1Q14863 301 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 CATSPEREQ5SY80 951 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 OTUD3Q5T2D3 398 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-203ENST00000354674 DESI1Q6ICB0 168 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 CRTC3Q6UUV7 619 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 GALNT12Q8IXK2 581 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 TOR1AIP2Q8NFQ8 470 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 SGF29Q96ES7 293 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 C7orf26Q96N11 449 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 LHPPQ9H008 270 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 EXD2Q9NVH0 621 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 STMN3Q9NZ72 180 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 PCDHGC4Q9Y5F7 938 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 PCDHGA10Q9Y5H3 936 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 ANKRD36A6QL64 1941 aa9.91□□□□□ -0.82
SYNE1-203ENST00000354674 LDB2O43679 373 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 KCNJ13O60928 360 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 TSC22D2O75157 780 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 KCNK2O95069 426 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 CLEC2LP0C7M8 214 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ITIH1P19827 911 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ME2P23368 584 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ARCN1P48444 511 aaKnown RBP9.9□□□□□ -0.82
SYNE1-203ENST00000354674 SNRPD1P62314 119 aaKnown RBP9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ALDH6A1Q02252 535 aaKnown RBP9.9□□□□□ -0.82
SYNE1-203ENST00000354674 SMAD4Q13485 552 aaKnown RBP9.9□□□□□ -0.82
SYNE1-203ENST00000354674 DGCR6Q14129 220 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 EIF4HQ15056 248 aaKnown RBP9.9□□□□□ -0.82
SYNE1-203ENST00000354674 CARD16Q5EG05 197 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 LRRC8EQ6NSJ5 796 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 SPNS2Q8IVW8 549 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 YAF2Q8IY57 180 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 SYTL1Q8IYJ3 562 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ALKBH8Q96BT7 664 aaKnown RBP9.9□□□□□ -0.82
SYNE1-203ENST00000354674 ECHDC3Q96DC8 303 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 CERS2Q96G23 380 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 SERPINI1Q99574 410 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 TRMT61BQ9BVS5 477 aaKnown RBP9.9□□□□□ -0.82
SYNE1-203ENST00000354674 TM6SF2Q9BZW4 377 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 SP140LQ9H930 580 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 HMG20AQ9NP66 347 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 DEC1Q9P2X7 70 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 PRRT4C9JH25 899 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 NRP2O60462 931 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 PGLSO95336 258 aa9.9□□□□□ -0.82
SYNE1-203ENST00000354674 BPGMP07738 259 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms