RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 UEVLDQ8IX04 471 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 HASPINQ8TF76 798 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 SLC38A5Q8WUX1 472 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 VCPIP1Q96JH7 1222 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 SAMD8Q96LT4 415 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 S1PR5Q9H228 398 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 FAM212BQ9NTI7 297 aaPredicted RBP1.59□□□□□ -2.16
BRCA1-202ENST00000354071 IL19Q9UHD0 177 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 DBNLQ9UJU6 430 aaKnown RBP1.59□□□□□ -2.16
BRCA1-202ENST00000354071 TCAF1Q9Y4C2 921 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 NRXN1Q9ULB1 1477 aa1.59□□□□□ -2.16
BRCA1-202ENST00000354071 DHX29Q7Z478 1369 aaKnown RBP1.59□□□□□ -2.16
BRCA1-202ENST00000354071 A0A0B4J203 849 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 VWA5AO00534 786 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ANKRD28O15084 1053 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 C1QL1O75973 258 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 NUDT17P0C025 328 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CHRNB2P17787 502 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 VCLP18206 1134 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PRDX6P30041 224 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SFNP31947 248 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TAGLN2P37802 199 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PITPNBP48739 271 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SELENOPP49908 381 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SNRPEP62304 92 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SIRPAP78324 504 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 MAP2K1Q02750 393 aaPredicted RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TUBA3CQ13748 450 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PTPRCAPQ14761 206 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 MORF4L2Q15014 288 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 EARS2Q5JPH6 523 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PIK3CD-AS1Q5SR53 167 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CEP85Q6P2H3 762 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TUBA3EQ6PEY2 450 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TRILQ7L0X0 811 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ERASQ7Z444 233 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CROCCP3Q8IVE0 287 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ELMOD2Q8IZ81 293 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TDHQ8IZJ6 230 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 RBFAQ8N0V3 343 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CLYBLQ8N0X4 340 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 FBXW8Q8N3Y1 598 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SCCPDHQ8NBX0 429 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 AGBL3Q8NEM8 1001 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 RAD54LQ92698 747 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DAZLQ92904 295 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SYAP1Q96A49 352 aaPredicted RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PKNOX2Q96KN3 472 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 MYADMQ96S97 322 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SLC38A3Q99624 504 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 RAD9AQ99638 391 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SEMA3CQ99985 751 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 LSG1Q9H089 658 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 KLHL31Q9H511 634 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CNGB3Q9NQW8 809 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TAS2R3Q9NYW6 316 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ERAP1Q9NZ08 941 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DDX25Q9UHL0 483 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 KCNS2Q9ULS6 477 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 LAMB1P07942 1786 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PKD1L3Q7Z443 1732 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DCHS1Q96JQ0 3298 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 hDV102S1A0JD36 115 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 POC1B-GALNT4F8VUJ3 575 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CCDC188H7C350 402 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 LANCL1O43813 399 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PRAMEF11O60813 436 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ATG13O75143 517 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ESRRBO95718 433 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 RAB40ALP0C0E4 278 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DANCRP0C864 163 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ACTN1P12814 892 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 MAOAP21397 527 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 UBA1P22314 1058 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ACAT1P24752 427 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SSTR2P30874 369 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 CORO1AP31146 461 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 FASLGP48023 281 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 METAP1P53582 386 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 PGGT1BP53609 377 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF91Q05481 1191 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF268Q14587 947 aaPredicted RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SYT16Q17RD7 645 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 MDH1BQ5I0G3 518 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TXNRD3NBQ6F5E7 133 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 DET1Q7L5Y6 550 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SHFQ7M4L6 423 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 TRAPPC11Q7Z392 1133 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ASPGQ86U10 573 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ZC3HC1Q86WB0 502 aaKnown RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 UNC5CLQ8IV45 518 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ODF3L1Q8IXM7 274 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 FAM47BQ8NA70 645 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 VANGL1Q8TAA9 524 aaPredicted RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 BCAS4Q8TDM0 211 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 INPP5DQ92835 1189 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 SEMA4DQ92854 862 aa1.58□□□□□ -2.16
BRCA1-202ENST00000354071 C16orf45Q96MC5 204 aaPredicted RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF703Q9H7S9 590 aaPredicted RBP1.58□□□□□ -2.16
BRCA1-202ENST00000354071 NGBQ9NPG2 151 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms