RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 HABP4Q5JVS0 413 aaKnown RBP16.31■□□□□ 0.2
SAMM50-201ENST00000350028 C9orf50Q5SZB4 431 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 NANOGP8Q6NSW7 305 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 ADGRD2Q7Z7M1 963 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 PTRH1Q86Y79 214 aaKnown RBP16.31■□□□□ 0.2
SAMM50-201ENST00000350028 RGL4Q8IZJ4 473 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 C12orf76Q8N812 135 aaPredicted RBP16.31■□□□□ 0.2
SAMM50-201ENST00000350028 L3MBTL4Q8NA19 623 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 TMIEQ8NEW7 156 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 FBXL8Q96CD0 374 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 AP2M1Q96CW1 435 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 ALG2Q9H553 416 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 NANOGQ9H9S0 305 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 FARSBQ9NSD9 589 aaKnown RBP16.31■□□□□ 0.2
SAMM50-201ENST00000350028 CCM2LQ9NUG4 571 aaPredicted RBP16.31■□□□□ 0.2
SAMM50-201ENST00000350028 DNAJC11Q9NVH1 559 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 C1orf109Q9NX04 203 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 PDP2Q9P2J9 529 aa16.31■□□□□ 0.2
SAMM50-201ENST00000350028 DPPA5A6NC42 116 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 ZNF839A8K0R7 811 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 H0Y858 1186 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 KPNA3O00505 521 aaPredicted RBP16.3■□□□□ 0.2
SAMM50-201ENST00000350028 SEC22BO75396 215 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 PIM1P11309 404 aaPredicted RBP16.3■□□□□ 0.2
SAMM50-201ENST00000350028 CASP2P42575 452 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 ERVK-21P61565 698 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 PWP1Q13610 501 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 KIAA0040Q15053 153 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 EIF4HQ15056 248 aaKnown RBP16.3■□□□□ 0.2
SAMM50-201ENST00000350028 PTCHD3Q3KNS1 767 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 SGO1Q5FBB7 561 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 FAM78AQ5JUQ0 283 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 SLC2A7Q6PXP3 512 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 TMC5Q6UXY8 1006 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 ZNF366Q8N895 744 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 LRTOMTQ8WZ04 291 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 MIEF2Q96C03 454 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 P2RY13Q9BPV8 354 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 KCTD14Q9BQ13 255 aaPredicted RBP16.3■□□□□ 0.2
SAMM50-201ENST00000350028 DEC1Q9P2X7 70 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 ZNHIT2Q9UHR6 403 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 CNOT6Q9ULM6 557 aaKnown RBP16.3■□□□□ 0.2
SAMM50-201ENST00000350028 SNX13Q9Y5W8 968 aa16.3■□□□□ 0.2
SAMM50-201ENST00000350028 KCNE1BA0A087WTH5 132 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 EDDM13A0A1B0GTR0 161 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 SERTM1A2A2V5 107 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 TXNDC9O14530 226 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 ARPC2O15144 300 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 HNRNPRO43390 633 aaKnown RBP16.29■□□□□ 0.2
SAMM50-201ENST00000350028 RNASEH1O60930 286 aaKnown RBP16.29■□□□□ 0.2
SAMM50-201ENST00000350028 ATG13O75143 517 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 CA3P07451 260 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 GSTM1P09488 218 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 IL10P22301 178 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 HTR1EP28566 365 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 MAGEA10P43363 369 aaPredicted RBP16.29■□□□□ 0.2
SAMM50-201ENST00000350028 MAPK9P45984 424 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 SLC6A11P48066 632 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 HMGCS1Q01581 520 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 GSTM4Q03013 218 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 ZXDCQ2QGD7 858 aaPredicted RBP16.29■□□□□ 0.2
SAMM50-201ENST00000350028 POM121L1PQ3SYA9 428 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 AASDHQ4L235 1098 aaPredicted RBP16.29■□□□□ 0.2
SAMM50-201ENST00000350028 FNDC3BQ53EP0 1204 aaKnown RBP16.29■□□□□ 0.2
SAMM50-201ENST00000350028 RABL3Q5HYI8 236 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 CAPRIN2Q6IMN6 1127 aaKnown RBP16.29■□□□□ 0.2
SAMM50-201ENST00000350028 CYP2U1Q7Z449 544 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 NPAS3Q8IXF0 933 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 KIAA2013Q8IYS2 634 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 RASGEF1AQ8N9B8 481 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 CANT1Q8WVQ1 401 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 OR8D1Q8WZ84 308 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 SMARCD2Q92925 531 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 GLMNQ92990 594 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 NXPE3Q969Y0 559 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 COQ10AQ96MF6 247 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 ASB16Q96NS5 453 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 CCM2Q9BSQ5 444 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 DPY30Q9C005 99 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 OBP2AQ9NY56 170 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 EGFL7Q9UHF1 273 aa16.29■□□□□ 0.2
SAMM50-201ENST00000350028 KANSL1LA0AUZ9 987 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 OR2AG2A6NM03 316 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 PRRT4C9JH25 899 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 PSIP1O75475 530 aaKnown RBP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 GPIP06744 558 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 ITGB7P26010 798 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 MAP4P27816 1152 aaKnown RBP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 PRLHRP49683 370 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 YBX1P67809 324 aaKnown RBP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 ELP6Q0PNE2 266 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 TMEM115Q12893 351 aaPredicted RBP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 PDK3Q15120 406 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 CPSF6Q16630 551 aaKnown RBP eCLIP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 DUSP6Q16828 381 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 HNRNPA1L2Q32P51 320 aaKnown RBP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 SYTL3Q4VX76 610 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 ZNF648Q5T619 568 aaPredicted RBP16.28■□□□□ 0.2
SAMM50-201ENST00000350028 DLEU7Q6UYE1 221 aa16.28■□□□□ 0.2
SAMM50-201ENST00000350028 PROSER1Q86XN7 944 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms