RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 GRIA1P42261 906 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 SESN2P58004 480 aaPredicted RBP12.03□□□□□ -0.48
SGCA-202ENST00000344627 RPS18P62269 152 aaKnown RBP12.03□□□□□ -0.48
SGCA-202ENST00000344627 FASTKD1Q53R41 847 aaKnown RBP12.03□□□□□ -0.48
SGCA-202ENST00000344627 MEI1Q5TIA1 1274 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 PRAMEF17Q5VTA0 474 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 AFTPHQ6ULP2 937 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 PPHLN1Q8NEY8 458 aaKnown RBP12.03□□□□□ -0.48
SGCA-202ENST00000344627 OR5AR1Q8NGP9 310 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 OR4L1Q8NH43 312 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 CPT1CQ8TCG5 803 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 RUFY1Q96T51 708 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 ING2Q9H160 280 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 TFB2MQ9H5Q4 396 aaKnown RBP12.03□□□□□ -0.48
SGCA-202ENST00000344627 ACTR10Q9NZ32 417 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 PAK5Q9P286 719 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 C5AR2Q9P296 337 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 SERTAD3Q9UJW9 196 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 ANAPC5Q9UJX4 755 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 PLAAQ9Y263 795 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 PADI2Q9Y2J8 665 aa12.03□□□□□ -0.48
SGCA-202ENST00000344627 CYSRT1A8MQ03 144 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 MEN1O00255 615 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 SUN1O94901 812 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 ST6GAL1P15907 406 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 RPL22P35268 128 aaKnown RBP12.02□□□□□ -0.49
SGCA-202ENST00000344627 TERF1P54274 439 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 OTUD6BQ8N6M0 293 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 GLIS1Q8NBF1 620 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 OR13J1Q8NGT2 312 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 CFAP61Q8NHU2 1237 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 UBE2Q2Q8WVN8 375 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 NACC2Q96BF6 587 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 TSSK1BQ9BXA7 367 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 CHRNA10Q9GZZ6 450 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 CHST8Q9H2A9 424 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 IRAK4Q9NWZ3 460 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 PLAGL1Q9UM63 463 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 SNX7Q9UNH6 387 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 TCAF1Q9Y4C2 921 aa12.02□□□□□ -0.49
SGCA-202ENST00000344627 ISM1B1AKI9 464 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 CEP104O60308 925 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 KDM1AO60341 852 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 CCDC175P0C221 793 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 NR1D1P20393 614 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 AGXTP21549 392 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 SHMT2P34897 504 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 CRADDP78560 199 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 BASP1P80723 227 aaKnown RBP12.01□□□□□ -0.49
SGCA-202ENST00000344627 HSPA14Q0VDF9 509 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 GPS2Q13227 327 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 CCNG2Q16589 344 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 ZNF658BQ4V348 819 aaPredicted RBP12.01□□□□□ -0.49
SGCA-202ENST00000344627 PACS1Q6VY07 963 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 UNC5AQ6ZN44 842 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 NLRP9Q7RTR0 991 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 TRIM73Q86UV7 250 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 RAB43Q86YS6 212 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 TBC1D21Q8IYX1 336 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 GPR135Q8IZ08 494 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 ADGRF3Q8IZF5 1079 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 DSELQ8IZU8 1212 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 OR1L3Q8NH93 324 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 GSDMBQ8TAX9 411 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 DENND1AQ8TEH3 1009 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 MAIP1Q8WWC4 291 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 ZNF778Q96MU6 729 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 TRAPPC9Q96Q05 1148 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 RANBP9Q96S59 729 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 ACTR5Q9H9F9 607 aaPredicted RBP12.01□□□□□ -0.49
SGCA-202ENST00000344627 CASS4Q9NQ75 786 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 CATSPERZQ9NTU4 200 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 POLG2Q9UHN1 485 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 ICKQ9UPZ9 632 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 MAP4K5Q9Y4K4 846 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 AP1M2Q9Y6Q5 423 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 CCDC88CQ9P219 2028 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 SNRNP200O75643 2136 aaKnown RBP12.01□□□□□ -0.49
SGCA-202ENST00000344627 RELNP78509 3460 aa12.01□□□□□ -0.49
SGCA-202ENST00000344627 NBASA2RRP1 2371 aa12□□□□□ -0.49
SGCA-202ENST00000344627 PTPN13Q12923 2485 aa12□□□□□ -0.49
SGCA-202ENST00000344627 TNRC6AQ8NDV7 1962 aaKnown RBP12□□□□□ -0.49
SGCA-202ENST00000344627 IQCF5A8MTL0 148 aa12□□□□□ -0.49
SGCA-202ENST00000344627 C9J4A7 227 aa12□□□□□ -0.49
SGCA-202ENST00000344627 E7EQ34 232 aa12□□□□□ -0.49
SGCA-202ENST00000344627 NRDCO43847 1150 aa12□□□□□ -0.49
SGCA-202ENST00000344627 IPO13O94829 963 aaKnown RBP12□□□□□ -0.49
SGCA-202ENST00000344627 SORBS2O94875 1100 aaKnown RBP12□□□□□ -0.49
SGCA-202ENST00000344627 TMEM63AO94886 807 aa12□□□□□ -0.49
SGCA-202ENST00000344627 AGFG2O95081 481 aa12□□□□□ -0.49
SGCA-202ENST00000344627 FGGP02679 453 aa12□□□□□ -0.49
SGCA-202ENST00000344627 UGT2B7P16662 529 aa12□□□□□ -0.49
SGCA-202ENST00000344627 PSMA3P25788 255 aa12□□□□□ -0.49
SGCA-202ENST00000344627 ACADLP28330 430 aa12□□□□□ -0.49
SGCA-202ENST00000344627 CXCR5P32302 372 aa12□□□□□ -0.49
SGCA-202ENST00000344627 CCL11P51671 97 aa12□□□□□ -0.49
SGCA-202ENST00000344627 MLLT10P55197 1068 aa12□□□□□ -0.49
SGCA-202ENST00000344627 ITGA1P56199 1179 aa12□□□□□ -0.49
SGCA-202ENST00000344627 PLOD1Q02809 727 aaPredicted RBP12□□□□□ -0.49
SGCA-202ENST00000344627 ABRQ12979 859 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms