RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 OXER1Q8TDS5 423 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 OR11A1Q9GZK7 315 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 PZPP20742 1482 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 RNF212BA8MTL3 300 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 H0YIN7 160 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 K7EPK0 472 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TOX4O94842 621 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 GNB3P16520 340 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ZNF20P17024 532 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ZNF7P17097 686 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 FAAP100Q0VG06 881 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 DBPQ10586 325 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 GFOD2Q3B7J2 385 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 PTCHD3Q3KNS1 767 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 NT5DC1Q5TFE4 455 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ALDH16A1Q8IZ83 802 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 FAM71E2Q8N5Q1 922 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 SMG8Q8ND04 991 aaKnown RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 RIT1Q92963 219 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 PSKH2Q96QS6 385 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ITGB4P16144 1822 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 BTNL10A8MVZ5 291 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ANGPTL7O43827 346 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 BCAS1O75363 584 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 HERVK_113P63132 956 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TLE1Q04724 770 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TOR1AIP1Q5JTV8 583 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TMEM214Q6NUQ4 689 aaKnown RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 TMEM179Q6ZVK1 233 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ZDHHC17Q8IUH5 632 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 COLGALT1Q8NBJ5 622 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TRUB1Q8WWH5 349 aaKnown RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 ART4Q93070 314 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ZNF578Q96N58 590 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 TTLL2Q9BWV7 592 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 RTFDC1Q9BY42 306 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 PPIL3Q9H2H8 161 aaKnown RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 NINJ2Q9NZG7 142 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 NPAP1Q9NZP6 1156 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TBX20Q9UMR3 447 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 GJA3Q9Y6H8 435 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ADAM12O43184 909 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 PROM1O43490 865 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ZBTB14O43829 449 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 PSMD10O75832 226 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 MICAL2O94851 1124 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 CCNB2O95067 398 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ETFAP13804 333 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TPH1P17752 444 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 MAKP20794 623 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 IMPDH1P20839 514 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 DGKAP23743 735 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 DGKGP49619 791 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 SP140Q13342 867 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 PPP2R2DQ66LE6 453 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 SPPL2CQ8IUH8 684 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 NDC1Q9BTX1 674 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 LACRTQ9GZZ8 138 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 UNC93B1Q9H1C4 597 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 UXTQ9UBK9 157 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 ZNF282Q9UDV7 671 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 PCDHA8Q9Y5H6 950 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 A2ML1A8K2U0 1454 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 HMX3A6NHT5 357 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TTLL8A6PVC2 850 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 F5H5T6 163 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 XPNPEP2O43895 674 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 NME6O75414 186 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 CDK8P49336 464 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 CLK3P49761 638 aaKnown RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 VSX2P58304 361 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 AVPI1Q5T686 147 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 LYPLAL1Q5VWZ2 237 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 MCEMP1Q8IX19 187 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 KLHL6Q8WZ60 621 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 GTF2H4Q92759 462 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 LRCH3Q96II8 777 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 OR4K3Q96R72 315 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 POTEKPQ9BYX7 375 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 POLR2J2Q9GZM3 115 aaKnown RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 FAM83DQ9H4H8 585 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 POLE4Q9NR33 117 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 DDIT4Q9NX09 232 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 RIMKLBQ9ULI2 386 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 MYOM1P52179 1685 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 PTPRJQ12913 1337 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TNFRSF11BO00300 401 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 GNAZP19086 355 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 MERTKQ12866 999 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TBC1D25Q3MII6 688 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ANKRD54Q6NXT1 300 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 SMARCD3Q6STE5 483 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 SPOCD1Q6ZMY3 1216 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 C12orf40Q86WS4 652 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TCF25Q9BQ70 676 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 TGIF2Q9GZN2 237 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 SLC38A1Q9H2H9 487 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 FAIMQ9NVQ4 179 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 USP17L15C9J2P7 530 aa6.06□□□□□ -1.44
VCAN-203ENST00000343200 USP17L13C9JLJ4 530 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms