RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 RNF14Q9UBS8 474 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 PLAGL1Q9UM63 463 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 CRYL1Q9Y2S2 319 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 MAD1L1Q9Y6D9 718 aa14.8□□□□□ -0.04
PRKN-201ENST00000338468 CCDC188H7C350 402 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 MATN2O00339 956 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 NIPSNAP2O75323 286 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 STK17BO94768 372 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 TIAF1O95411 115 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 APOA4P06727 396 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 FGF5P12034 268 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 PRDX3P30048 256 aaKnown RBP14.79□□□□□ -0.04
PRKN-201ENST00000338468 ETF1P62495 437 aaKnown RBP14.79□□□□□ -0.04
PRKN-201ENST00000338468 ABRQ12979 859 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 CTBP1Q13363 440 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 GRB7Q14451 532 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 GBX1Q14549 363 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 IL11RAQ14626 422 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 DNAJC21Q5F1R6 531 aaKnown RBP14.79□□□□□ -0.04
PRKN-201ENST00000338468 RNF187Q5TA31 235 aaPredicted RBP14.79□□□□□ -0.04
PRKN-201ENST00000338468 KIAA1614Q5VZ46 1190 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 ZNF470Q6ECI4 717 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 ARMC6Q6NXE6 501 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 UNC5AQ6ZN44 842 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 CCDC81Q6ZN84 652 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 CACNA2D3Q8IZS8 1091 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 CARFQ8N187 725 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 SIDT2Q8NBJ9 832 aaKnown RBP14.79□□□□□ -0.04
PRKN-201ENST00000338468 STAMBPL1Q96FJ0 436 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 ELMO2Q96JJ3 720 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 RUNDC3BQ96NL0 473 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 PANX3Q96QZ0 392 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 WDR83Q9BRX9 315 aaKnown RBP14.79□□□□□ -0.04
PRKN-201ENST00000338468 PITPNM3Q9BZ71 974 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 WDR70Q9NW82 654 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 SPHK1Q9NYA1 384 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 POLG2Q9UHN1 485 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 TDRKHQ9Y2W6 561 aaKnown RBP14.79□□□□□ -0.04
PRKN-201ENST00000338468 MED16Q9Y2X0 877 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 PCDHB11Q9Y5F2 797 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 FAM169AQ9Y6X4 670 aa14.79□□□□□ -0.04
PRKN-201ENST00000338468 PTPN13Q12923 2485 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 GSAPA4D1B5 854 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 SLC9B1P1A6NJY1 282 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 SPAG6O75602 509 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 ZBTB11O95625 1053 aaPredicted RBP14.78□□□□□ -0.04
PRKN-201ENST00000338468 ESR1P03372 595 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 ST6GAL1P15907 406 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 PEBP1P30086 187 aaKnown RBP14.78□□□□□ -0.04
PRKN-201ENST00000338468 SLC1A2P43004 574 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 PAFAH1B1P43034 410 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 CSRP3P50461 194 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 HSD11B2P80365 405 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 MRPS25P82663 173 aaKnown RBP14.78□□□□□ -0.04
PRKN-201ENST00000338468 PRKAA1Q13131 559 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 CRYMQ14894 314 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 MORF4L2Q15014 288 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 LONRF1Q17RB8 773 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 MANEAQ5SRI9 462 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 PLEKHS1Q5SXH7 462 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 HIBCHQ6NVY1 386 aaPredicted RBP14.78□□□□□ -0.04
PRKN-201ENST00000338468 ZNF549Q6P9A3 640 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 PCGF5Q86SE9 256 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 LMNTD1Q8N9Z9 388 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 FAM136AQ96C01 138 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 KRT12Q99456 494 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 EBNA1BP2Q99848 306 aaKnown RBP14.78□□□□□ -0.04
PRKN-201ENST00000338468 FBXO6Q9NRD1 293 aaPredicted RBP14.78□□□□□ -0.04
PRKN-201ENST00000338468 LATS2Q9NRM7 1088 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 C1GALT1Q9NS00 363 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 C20orf96Q9NUD7 363 aaPredicted RBP14.78□□□□□ -0.04
PRKN-201ENST00000338468 INTS10Q9NVR2 710 aaKnown RBP14.78□□□□□ -0.04
PRKN-201ENST00000338468 ACTR10Q9NZ32 417 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 RUVBL2Q9Y230 463 aaKnown RBP14.78□□□□□ -0.04
PRKN-201ENST00000338468 BTRCQ9Y297 605 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 HEMK1Q9Y5R4 338 aaPredicted RBP14.78□□□□□ -0.04
PRKN-201ENST00000338468 NFS1Q9Y697 457 aa14.78□□□□□ -0.04
PRKN-201ENST00000338468 LOC101059948A0A1B0GTJ6 334 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 SEC31AO94979 1220 aaKnown RBP14.77□□□□□ -0.05
PRKN-201ENST00000338468 CHRM5P08912 532 aaPredicted RBP14.77□□□□□ -0.05
PRKN-201ENST00000338468 PKMP14618 531 aaKnown RBP14.77□□□□□ -0.05
PRKN-201ENST00000338468 LIFP15018 202 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 PVRP15151 417 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 PGAM1P18669 254 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 SHMT2P34897 504 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 ATP1A2P50993 1020 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 ITGA8P53708 1063 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 MPP1Q00013 466 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 TUBB3Q13509 450 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 THOC5Q13769 683 aaKnown RBP14.77□□□□□ -0.05
PRKN-201ENST00000338468 TMED2Q15363 201 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 GPR19Q15760 415 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 KYNUQ16719 465 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.77□□□□□ -0.05
PRKN-201ENST00000338468 HSP90AA5PQ58FG0 334 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 PWWP2BQ6NUJ5 590 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 UNC5DQ6UXZ4 953 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 SYT10Q6XYQ8 523 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 OTOAQ7RTW8 1153 aa14.77□□□□□ -0.05
PRKN-201ENST00000338468 NLGN4XQ8N0W4 816 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms