RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 FYTTD1Q96QD9 318 aaKnown RBP16.31■□□□□ 0.2
PACS1-201ENST00000320580 SPATA9Q9BWV2 254 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 CD300AQ9UGN4 299 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 CHURC1-FNTBB4DL54 471 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 INMT-MINDY4F8WBC2 141 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 NR2F6P10588 404 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 DNAJA1P31689 397 aaKnown RBP16.31■□□□□ 0.2
PACS1-201ENST00000320580 EFR3AQ14156 821 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 ESCO2Q56NI9 601 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 ZNF678Q5SXM1 525 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 CDK15Q96Q40 435 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 OR51E2Q9H255 320 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 NTN4Q9HB63 628 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 SLC35C2Q9NQQ7 365 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 C1orf109Q9NX04 203 aa16.31■□□□□ 0.2
PACS1-201ENST00000320580 MICAL3Q7RTP6 2002 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 A0A0G2JPF8 293 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
PACS1-201ENST00000320580 HNRNPCL3B7ZW38 293 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 ALPLP05186 524 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 HNRNPCL4P0DMR1 293 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 SOWAHAQ2M3V2 549 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 PAGE3Q5JUK9 113 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 ZNF534Q76KX8 674 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 GDPD3Q7L5L3 318 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 SLC38A6Q8IZM9 456 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 PCNPQ8WW12 178 aaKnown RBP16.3■□□□□ 0.2
PACS1-201ENST00000320580 C11orf24Q96F05 449 aaPredicted RBP16.3■□□□□ 0.2
PACS1-201ENST00000320580 MBD2Q9UBB5 411 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 OPTCQ9UBM4 332 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 USP22Q9UPT9 525 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 NOD1Q9Y239 953 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 LRRC14BA6NHZ5 514 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 ADARB1P78563 741 aaKnown RBP16.3■□□□□ 0.2
PACS1-201ENST00000320580 GALEQ14376 348 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 SV2CQ496J9 727 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 PHACTR4Q8IZ21 702 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 DTWD1Q8N5C7 304 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 SELENOMQ8WWX9 145 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 GTPBP3Q969Y2 492 aaKnown RBP16.3■□□□□ 0.2
PACS1-201ENST00000320580 NSUN5Q96P11 429 aaKnown RBP16.3■□□□□ 0.2
PACS1-201ENST00000320580 WACQ9BTA9 647 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 HOXC10Q9NYD6 342 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 EIF2B4Q9UI10 523 aaKnown RBP16.3■□□□□ 0.2
PACS1-201ENST00000320580 NUP50Q9UKX7 468 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 PIN4Q9Y237 131 aaKnown RBP16.3■□□□□ 0.2
PACS1-201ENST00000320580 PCDHB14Q9Y5E9 798 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 DNAJC15Q9Y5T4 150 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 SNX10Q9Y5X0 201 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 A8MUA0 341 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 DLGAP1O14490 977 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 STSP08842 583 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 EVI2BP34910 448 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 MAP2K3P46734 347 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 SMN1Q16637 294 aaKnown RBP16.3■□□□□ 0.2
PACS1-201ENST00000320580 UGT8Q16880 541 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 RUNDC3AQ59EK9 446 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 TECRLQ5HYJ1 363 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 C9orf131Q5VYM1 1079 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 LSMEM2Q8N112 164 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 YIPF7Q8N8F6 280 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 PTCD2Q8WV60 388 aaKnown RBP16.3■□□□□ 0.2
PACS1-201ENST00000320580 CHIAQ9BZP6 476 aa16.3■□□□□ 0.2
PACS1-201ENST00000320580 UBQLN1Q9UMX0 589 aaKnown RBP16.3■□□□□ 0.2
PACS1-201ENST00000320580 CDK14O94921 469 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 VIPP01282 170 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 HOXB6P17509 224 aaKnown RBP16.29■□□□□ 0.2
PACS1-201ENST00000320580 CXCR3P49682 368 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 CTBSQ01459 385 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 ST3GAL4Q11206 333 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 POU4F3Q15319 338 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 CPSF6Q16630 551 aaKnown RBP eCLIP16.29■□□□□ 0.2
PACS1-201ENST00000320580 CES5AQ6NT32 575 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 FAM92BQ6ZTR7 304 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 PRSS48Q7RTY5 328 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 PLCZ1Q86YW0 608 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 OR6C4Q8NGE1 309 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 FERD3LQ96RJ6 166 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 DOK1Q99704 481 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 PRDM8Q9NQV8 689 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 NLKQ9UBE8 527 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 DFNA5O60443 496 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 TSPAN1O60635 241 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 PDGFAP04085 211 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 CYP2B6P20813 491 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 GPX3P22352 226 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 HSF2Q03933 536 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 DCLRE1AQ6PJP8 1040 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 VWA5B2Q8N398 1253 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 DTX3Q8N9I9 347 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 POP5Q969H6 163 aaKnown RBP16.29■□□□□ 0.2
PACS1-201ENST00000320580 RNF121Q9H920 327 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 ZIM2Q9NZV7 527 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 FZD10Q9ULW2 581 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 NCKAP1Q9Y2A7 1128 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 CMAHPQ9Y471 501 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 OR51F1A6NGY5 319 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 TLL1O43897 1013 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 HBP1O60381 514 aa16.29■□□□□ 0.2
PACS1-201ENST00000320580 PLATP00750 562 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms