RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 NDUFS4O43181 175 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 OR4F21O95013 312 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 CCT8P50990 548 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 OC90Q02509 493 aaPredicted RBP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 SQLEQ14534 574 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 ZNF77Q15935 545 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 CLHC1Q8NHS4 586 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 MR1Q95460 341 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 MARK4Q96L34 752 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 PLEKHG4BQ96PX9 1271 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 OR52E6Q96RD3 313 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 MTERF1Q99551 399 aaKnown RBP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 APOOQ9BUR5 198 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 SLC17A7Q9P2U7 560 aa9.07□□□□□ -0.96
PTPRE-202ENST00000306042 LEF1Q9UJU2 399 aaPredicted RBP9.07□□□□□ -0.96
PTPRE-202ENST00000306042 MYO1CO00159 1063 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 AHSGP02765 367 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 KLKB1P03952 638 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 CAPN1P07384 714 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 PDHA1P08559 390 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 ACRV1P26436 265 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 EPHA3P29320 983 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 CLDN2P57739 230 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 HHEXQ03014 270 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 ZNF155Q12901 538 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-202ENST00000306042 SLC9A5Q14940 896 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 KIAA0895LQ68EN5 471 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 NADSYN1Q6IA69 706 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 AGTRAPQ6RW13 159 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 PARP9Q8IXQ6 854 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 FAM98AQ8NCA5 519 aaKnown RBP9.06□□□□□ -0.96
PTPRE-202ENST00000306042 ACTRT2Q8TDY3 377 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 EEF1AKMT1Q8WVE0 214 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 RMI1Q9H9A7 625 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 PLAGL1Q9UM63 463 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 OR6C74A6NCV1 312 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 TRIM24O15164 1050 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 KCNJ13O60928 360 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 IGFBP6P24592 240 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-202ENST00000306042 PSMA3P25788 255 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 GFM1Q96RP9 751 aaKnown RBP9.06□□□□□ -0.96
PTPRE-202ENST00000306042 CCT7Q99832 543 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 PRRG4Q9BZD6 226 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 POLR1BQ9H9Y6 1135 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 CLCA3PQ9Y6N3 262 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 VSTM5A8MXK1 200 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 LYPLA1O75608 230 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-202ENST00000306042 UROSP10746 265 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 HOXC8P31273 242 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 TRPC1P48995 793 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 PGDP52209 483 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 SP140Q13342 867 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 SLC5A9Q2M3M2 681 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 PIM3Q86V86 326 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 OR4A15Q8NGL6 344 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 DTX3LQ8TDB6 740 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 DUSP23Q9BVJ7 150 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 XKR8Q9H6D3 395 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 IMPAD1Q9NX62 359 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 THAP10Q9P2Z0 257 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-202ENST00000306042 ATP6V1HQ9UI12 483 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 ANGPT4Q9Y264 503 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 SLC22A14Q9Y267 594 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 A0A0G2JN53 185 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 HHLA1C9JL84 531 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 HOXC11O43248 304 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-202ENST00000306042 ERI3O43414 337 aaKnown RBP9.06□□□□□ -0.96
PTPRE-202ENST00000306042 SLC25A12O75746 678 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 CD63P08962 238 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 BPIP17213 487 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 NOS3P29474 1203 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 SRP54P61011 504 aaKnown RBP9.06□□□□□ -0.96
PTPRE-202ENST00000306042 IRX1P78414 480 aaPredicted RBP9.06□□□□□ -0.96
PTPRE-202ENST00000306042 MC1RQ01726 317 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 BIKQ13323 160 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 VPS26BQ4G0F5 336 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 DEFB107AQ8IZN7 70 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 POU5F2Q8N7G0 328 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 CKAP2Q8WWK9 683 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 LRCH3Q96II8 777 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 ITCHQ96J02 903 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 HBEGFQ99075 208 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 FOXQ1Q9C009 403 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 PRSS16Q9NQE7 514 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 SLC17A6Q9P2U8 582 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 HAO1Q9UJM8 370 aa9.06□□□□□ -0.96
PTPRE-202ENST00000306042 URB1O60287 2271 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 FAM220BPB1ANY3 271 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 GLULP15104 373 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 POU1F1P28069 291 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 RPS7P62081 194 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 GSTM4Q03013 218 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 PWP1Q13610 501 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 TRIM61Q5EBN2 209 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 DPPA4Q7L190 304 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 ZC3HC1Q86WB0 502 aaKnown RBP9.05□□□□□ -0.96
PTPRE-202ENST00000306042 SYNPOQ8N3V7 929 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 SLC44A3Q8N4M1 653 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 KIF2BQ8N4N8 673 aa9.05□□□□□ -0.96
PTPRE-202ENST00000306042 TWIST2Q8WVJ9 160 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms