RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 SMPD4Q9NXE4 827 aa17.47■□□□□ 0.39
TSPAN17-201ENST00000298564 ZNF639Q9UID6 485 aa17.47■□□□□ 0.39
TSPAN17-201ENST00000298564 PMF1-BGLAPU3KQ54 211 aa17.47■□□□□ 0.39
TSPAN17-201ENST00000298564 GSTA4O15217 222 aa17.47■□□□□ 0.39
TSPAN17-201ENST00000298564 NDUFS2O75306 463 aa17.47■□□□□ 0.39
TSPAN17-201ENST00000298564 ALDH7A1P49419 539 aaKnown RBP17.47■□□□□ 0.39
TSPAN17-201ENST00000298564 ADGRF1Q5T601 910 aa17.47■□□□□ 0.39
TSPAN17-201ENST00000298564 PAPD5Q8NDF8 572 aaKnown RBP17.47■□□□□ 0.39
TSPAN17-201ENST00000298564 MRPL9Q9BYD2 267 aaKnown RBP17.47■□□□□ 0.39
TSPAN17-201ENST00000298564 VAPAQ9P0L0 249 aa17.47■□□□□ 0.39
TSPAN17-201ENST00000298564 ZMYM5Q9UJ78 669 aa17.47■□□□□ 0.39
TSPAN17-201ENST00000298564 NUP214P35658 2090 aaPredicted RBP17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 A0A1B0GVM2 712 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 SYCE1LA8MT33 242 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 EEDO75530 441 aaKnown RBP17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 PRSS23O95084 383 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 CD160O95971 181 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 TCEA1P23193 301 aaKnown RBP17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 NR4A2P43354 598 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 GTDC1Q4AE62 458 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 FAM98BQ52LJ0 330 aaKnown RBP17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 ZRANB3Q5FWF4 1079 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 C6orf136Q5SQH8 315 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 IRAK1BP1Q5VVH5 260 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 ANKS6Q68DC2 871 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 CXorf57Q6NSI4 855 aaKnown RBP17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 PAGE2Q7Z2X7 111 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 CLIP4Q8N3C7 705 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 ZNF555Q8NEP9 628 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 UBE2FQ969M7 185 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 BARD1Q99728 777 aaKnown RBP17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 HMG20AQ9NP66 347 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 TRPM5Q9NZQ8 1165 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 ADGRE2Q9UHX3 823 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 IQCF5A8MTL0 148 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 PSMD11O00231 422 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 PRKD3O94806 890 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 CNPP09543 421 aaKnown RBP17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 CDH1P12830 882 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 JUNBP17275 347 aaPredicted RBP17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 PSMB9P28065 219 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 GSSP48637 474 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 EMX2Q04743 252 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 KIAA1841Q6NSI8 718 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 DLEU7Q6UYE1 221 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 ADCK1Q86TW2 530 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 HID1Q8IV36 788 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 PLD4Q96BZ4 506 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 AURKBQ96GD4 344 aaPredicted RBP17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 VN1R3Q9BXE9 311 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 ENPP5Q9UJA9 477 aa17.46■□□□□ 0.39
TSPAN17-201ENST00000298564 UGT2B11O75310 529 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 PKMP14618 531 aaKnown RBP17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 NOGQ13253 232 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 PTGR1Q14914 329 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 CLHC1Q8NHS4 586 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 PNPT1Q8TCS8 783 aaKnown RBP17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 EEF1AKMT1Q8WVE0 214 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 NCLNQ969V3 563 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 SLX1AQ9BQ83 275 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 ADGRE3Q9BY15 652 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 SLC1A7O00341 560 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 LSM1O15116 133 aaKnown RBP17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 STX7O15400 261 aaKnown RBP17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 HOXA2O43364 376 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 DIRAS1O95057 198 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 B3GALT4O96024 378 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 RAP2AP10114 183 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 C7P10643 843 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 SELENBP1Q13228 472 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 PLD1Q13393 1074 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 RAPSNQ13702 412 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 TAF12Q16514 161 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 CTSL3PQ5NE16 218 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 IL27RAQ6UWB1 636 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 Q6ZSR9 355 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 PXYLP1Q8TE99 480 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 CLSTN3Q9BQT9 956 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 RETREG1Q9H6L5 497 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 PALMDQ9NP74 551 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 AKIP1Q9NQ31 210 aa17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 POLR3HQ9Y535 204 aaPredicted RBP17.45■□□□□ 0.38
TSPAN17-201ENST00000298564 LOC100130705A0A1B0GUX0 176 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 FADS2O95864 444 aaKnown RBP17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 MYCP01106 439 aaPredicted RBP17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 ANXA6P08133 673 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 UMPSP11172 480 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 MZF1P28698 734 aaPredicted RBP17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 CCL23P55773 120 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 EEFSECP57772 596 aaKnown RBP17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 TWF1Q12792 350 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 SGO1Q5FBB7 561 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 DET1Q7L5Y6 550 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 MCOLN3Q8TDD5 553 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 YTHDF1Q9BYJ9 559 aaKnown RBP17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 VPS26AO75436 327 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 TSPAN12O95859 305 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 HTR1EP28566 365 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 GJA8P48165 433 aa17.44■□□□□ 0.38
TSPAN17-201ENST00000298564 RAB15P59190 212 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms