RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CD200R1Q8TD46 325 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 CALML6Q8TD86 181 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 DCAKDQ8WVC6 231 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 SLC44A1Q8WWI5 657 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 CAVIN3Q969G5 261 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 SKA1Q96BD8 255 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 DCUN1D1Q96GG9 259 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 ATXN7L3BQ96GX2 97 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 VPS39Q96JC1 886 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 TTC25Q96NG3 672 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 RBBP8Q99708 897 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 CCM2Q9BSQ5 444 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 DHRS4Q9BTZ2 278 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 TSPYL1Q9H0U9 437 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 OR52A5Q9H2C5 316 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 COG4Q9H9E3 785 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 PPANQ9NQ55 473 aaKnown RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 EURLQ9NYK6 297 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 NLGN3Q9NZ94 848 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 SIRPGQ9P1W8 387 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 ZNF624Q9P2J8 865 aaPredicted RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 SPASTQ9UBP0 616 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 IKZF3Q9UKT9 509 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 PCOLCE2Q9UKZ9 415 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 DNAJC16Q9Y2G8 782 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 PCDHGB2Q9Y5G2 931 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 NFS1Q9Y697 457 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 CSNK1G3Q9Y6M4 447 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 CEP295Q9C0D2 2601 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 NCOR2Q9Y618 2525 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 AHCTF1Q8WYP5 2266 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 TRBV23OR9-2A0A075B6M9 112 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 C17orf113A0A1B0GUU1 675 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 FAM95CA0A1B0GW59 222 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 KRT87PA6NCN2 255 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 OR52A4PA6NMU1 304 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 FOXO6A8MYZ6 492 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 B4DGG1 531 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 F8W735 103 aaPredicted RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 YKT6O15498 198 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 SPAG6O75602 509 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 TRIM16O95361 564 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 DLGAP3O95886 979 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 CTSBP07858 339 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 CELA3AP09093 270 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 OR56A5P0C7T3 313 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 TPBGLP0DKB5 382 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 RALBP11234 206 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 CTSEP14091 401 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 ACADLP28330 430 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 BLKP51451 505 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 LIMK2P53671 638 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 CSE1LP55060 971 aaKnown RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 TAS2R39P59534 338 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 UBE2IP63279 158 aaKnown RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 TUBB4BP68371 445 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 ILF3Q12906 894 aaKnown RBP eCLIP5.76□□□□□ -1.49
SSX3-201ENST00000298396 DLG1Q12959 904 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 BMPR2Q13873 1038 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 LRP8Q14114 963 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 BRD3Q15059 726 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 ELOCQ15369 112 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 SEPT7Q16181 437 aaKnown RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 ACSBG2Q5FVE4 666 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 BEND6Q5SZJ8 279 aaPredicted RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 RNF187Q5TA31 235 aaPredicted RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 HECTD2Q5U5R9 776 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 AGAP9Q5VTM2 703 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 CAPRIN2Q6IMN6 1127 aaKnown RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 EMBQ6PCB8 327 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 SHISA2Q6UWI4 295 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 WASH2PQ6VEQ5 465 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 CYHR1Q6ZMK1 362 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 SDCCAG8Q86SQ7 713 aaPredicted RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 AMZ2Q86W34 360 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 LRRC6Q86X45 466 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 NAXDQ8IW45 347 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 SLC22A15Q8IZD6 547 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 SFRP1Q8N474 314 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 MREGQ8N565 214 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 FAM181AQ8N9Y4 354 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 SIDT2Q8NBJ9 832 aaKnown RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 OR2W6PQ8NHA6 318 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 HM13Q8TCT9 377 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 STK35Q8TDR2 534 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 SLC37A2Q8TED4 501 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 MZB1Q8WU39 189 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 HEXDCQ8WVB3 486 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.76□□□□□ -1.49
SSX3-201ENST00000298396 ELMO1Q92556 727 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 ZNF514Q96K75 400 aaPredicted RBP5.76□□□□□ -1.49
SSX3-201ENST00000298396 APOLD1Q96LR9 279 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 PAFAH2Q99487 392 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 GPR21Q99679 349 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 GPR22Q99680 433 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 CPNE1Q99829 537 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 RSRP1Q9BUV0 290 aa5.76□□□□□ -1.49
SSX3-201ENST00000298396 SSBP4Q9BWG4 385 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms