RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CLPXO76031 633 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 PRAMEF1O95521 474 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 PKMP14618 531 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 TYRP14679 529 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 CEBPBP17676 345 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 ALDH3A2P51648 485 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 CLCQ05315 142 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 RBM48Q5RL73 367 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 EFL1Q7Z2Z2 1120 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 SLC15A4Q8N697 577 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 VPS33AQ96AX1 596 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 MUS81Q96NY9 551 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 LRRC3BQ96PB8 259 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 ABCG8Q9H221 673 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 TMEM45AQ9NWC5 275 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 NPEPPSL1A6NEC2 478 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 NPIPB15A6NHN6 443 aaPredicted RBP17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 CCDC154A6NI56 674 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 H0Y858 1186 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 TULP3O75386 442 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 IGSF6O95976 241 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 CDH1P12830 882 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 ZFP36L2P47974 494 aaKnown RBP17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 TTPAP49638 278 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 PAGE3Q5JUK9 113 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 TMEM215Q68D42 235 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 TBPL2Q6SJ96 375 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 RIMKLAQ8IXN7 391 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 KIAA2013Q8IYS2 634 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 SNX19Q92543 992 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 IRF7Q92985 503 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 NUSAP1Q9BXS6 441 aaKnown RBP17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 BRINP2Q9C0B6 783 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 PCDHGA11Q9Y5H2 935 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 H7C0S8 307 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 CRCPO75575 148 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 CA3P07451 260 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 ENO2P09104 434 aaPredicted RBP17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 ITGB6P18564 788 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 HRH2P25021 359 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 ELK4P28324 431 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 ARSFP54793 590 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 EMX2Q04743 252 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 CDKN3Q16667 212 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 XAF1Q6GPH4 301 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 C22orf39Q6P5X5 142 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 DPY19L3Q6ZPD9 716 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 RFLNAQ6ZTI6 216 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 Q6ZVU0 165 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 ADGRD2Q7Z7M1 963 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 CLDN19Q8N6F1 224 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 CHST14Q8NCH0 376 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 EEF1AKMT1Q8WVE0 214 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 ESAMQ96AP7 390 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 SEPHS2Q99611 448 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 ING2Q9H160 280 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 MTG2Q9H4K7 406 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 ZDHHC6Q9H6R6 413 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 ATP13A3Q9H7F0 1226 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 MAGEL2Q9UJ55 1249 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 GBF1Q92538 1859 aa17.94■□□□□ 0.46
PDLIM3-201ENST00000284767 A0A1B0GTL3 188 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 GRXCR2A6NFK2 248 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 KERAO60938 352 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 SLC22A3O75751 556 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 ATP1A4Q13733 1029 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 PRSS36Q5K4E3 855 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 NCCRP1Q6ZVX7 275 aaPredicted RBP17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 ITFG1Q8TB96 612 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 NSMCE2Q96MF7 247 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 RNF145Q96MT1 663 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 NANOGQ9H9S0 305 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 IL26Q9NPH9 171 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 SPHK2Q9NRA0 654 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 INIPQ9NRY2 104 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 DOLKQ9UPQ8 538 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 DEAF1O75398 565 aaPredicted RBP17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 PRSS23O95084 383 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 TSPAN12O95859 305 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 CDH3P22223 829 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 GSTM2P28161 218 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 EEF1DP29692 281 aaKnown RBP17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 POLR2JP52435 117 aaKnown RBP17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 DAG1Q14118 895 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 ARHGAP15Q53QZ3 475 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 C9orf50Q5SZB4 431 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 GALNT18Q6P9A2 607 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 PRR23BQ6ZRT6 265 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 CD200R1Q8TD46 325 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 CYB5D2Q8WUJ1 264 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 RDH12Q96NR8 316 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 HPS4Q9NQG7 708 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 PCDHB3Q9Y5E6 796 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 CORINQ9Y5Q5 1042 aa17.93■□□□□ 0.46
PDLIM3-201ENST00000284767 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 SUPT3HB4E1H0 165 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 J3QRK9 145 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 BTN3A1O00481 513 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 HPRP00739 348 aa17.92■□□□□ 0.46
PDLIM3-201ENST00000284767 UGT2B4P06133 528 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms