RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 TXNL4AP83876 142 aaKnown RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 GPR158Q5T848 1215 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CRYBG2Q8N1P7 616 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CADM2Q8N3J6 435 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 SLC44A3Q8N4M1 653 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CCDC54Q8NEL0 328 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF514Q96K75 400 aaPredicted RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 ZSWIM3Q96MP5 696 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 TFB2MQ9H5Q4 396 aaKnown RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 ARHGEF4Q9NR80 690 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF451Q9Y4E5 1061 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CSTF1Q05048 431 aaKnown RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 MAPK14Q16539 360 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 DNM1P34Q6PK57 102 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 PIGWQ7Z7B1 504 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 KAT2AQ92830 837 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 FLRT1Q9NZU1 646 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 U3KQV3 271 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 MATN3O15232 486 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 MID1O15344 667 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 HCN1O60741 890 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 SPATA31C1P0DKV0 1188 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 ITPKBP27987 946 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 TNFSF9P41273 254 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CDKL1Q00532 357 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 IL10RBQ08334 325 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 SEMA3AQ14563 771 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 COX18Q8N8Q8 333 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 RHBDF1Q96CC6 855 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 EBF3Q9H4W6 596 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 TBC1D17Q9HA65 648 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 TBCCD1Q9NVR7 557 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 NKIRAS2Q9NYR9 191 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 PTBP2Q9UKA9 531 aaKnown RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 ALG5Q9Y673 324 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CDH10Q9Y6N8 788 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 BUD23O43709 281 aaKnown RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 APOL3O95236 402 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 GRK6P43250 576 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CYP2S1Q96SQ9 504 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 BRINP2Q9C0B6 783 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 POLR3BQ9NW08 1133 aaPredicted RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CFAP97Q9P2B7 532 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 IGSF9Q9P2J2 1179 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 PCDHGA11Q9Y5H2 935 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 LRRC72A6NJI9 287 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 WASHC1A8K0Z3 465 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 WASH3PC4AMC7 463 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CYP11A1P05108 521 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 TACR2P21452 398 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 PSMD8P48556 350 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 TAS2R43P59537 309 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 MAXP61244 160 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 BEX3Q00994 111 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CXCL9Q07325 125 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 FSTL1Q12841 308 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF613Q6PF04 617 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 WASH2PQ6VEQ5 465 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 GRHL1Q9NZI5 618 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 A0A1B0GVC2 190 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 SMAD9O15198 467 aaKnown RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 NPPAP01160 153 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 TAL1P17542 331 aaPredicted RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 LAG3P18627 525 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 NSG1P42857 185 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 TSPAN5P62079 268 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 NAE1Q13564 534 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 TRAM1Q15629 374 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 GALNTL5Q7Z4T8 443 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 C7orf57Q8NEG2 295 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CEP76Q8TAP6 659 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 SLCO2A1Q92959 643 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 KXD1Q9BQD3 176 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 WDR55Q9H6Y2 383 aaPredicted RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 PACSIN3Q9UKS6 424 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 SMCO3A2RU48 225 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 PRKD3O94806 890 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 CYP17A1P05093 508 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 ZNF823P16415 610 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 L1CAMP32004 1257 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 AURKBQ96GD4 344 aaPredicted RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 TUBA1CQ9BQE3 449 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 INSIG1O15503 277 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 SIM2Q14190 667 aaPredicted RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 OTOP3Q7RTS5 596 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 OR52J3Q8NH60 311 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 DPF3Q92784 378 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 KREMEN1Q96MU8 473 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 SLC4A9Q96Q91 983 aa7.84□□□□□ -1.15
LIMD1-201ENST00000273317 EIF3KQ9UBQ5 218 aaKnown RBP7.84□□□□□ -1.15
LIMD1-201ENST00000273317 FKBP1BP68106 108 aa7.84□□□□□ -1.16
LIMD1-201ENST00000273317 WSCD2Q2TBF2 565 aa7.84□□□□□ -1.16
LIMD1-201ENST00000273317 POM121L1PQ3SYA9 428 aa7.84□□□□□ -1.16
LIMD1-201ENST00000273317 NIPAL1Q6NVV3 410 aa7.84□□□□□ -1.16
LIMD1-201ENST00000273317 TMEM110Q86TL2 294 aa7.84□□□□□ -1.16
LIMD1-201ENST00000273317 CADM1Q9BY67 442 aaKnown RBP7.84□□□□□ -1.16
LIMD1-201ENST00000273317 C14orf166Q9Y224 244 aaKnown RBP7.84□□□□□ -1.16
LIMD1-201ENST00000273317 REXO2Q9Y3B8 237 aaKnown RBP7.84□□□□□ -1.16
LIMD1-201ENST00000273317 TRIM17Q9Y577 477 aa7.84□□□□□ -1.16
LIMD1-201ENST00000273317 ABCC6O95255 1503 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms