RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 ACSL5Q9ULC5 683 aa13.76□□□□□ -0.21
SS18-201ENST00000269137 FIS1Q9Y3D6 152 aa13.76□□□□□ -0.21
SS18-201ENST00000269137 ANGPTL3Q9Y5C1 460 aa13.76□□□□□ -0.21
SS18-201ENST00000269137 ST14Q9Y5Y6 855 aa13.76□□□□□ -0.21
SS18-201ENST00000269137 GOLGA8QA0A0J9YX86 632 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 GOLGA8OA6NCC3 632 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 PRR19A6NJB7 356 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 GOLGA8NF8WBI6 632 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 KATNA1O75449 491 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 SKAP2O75563 359 aaPredicted RBP13.75□□□□□ -0.21
SS18-201ENST00000269137 CRCPO75575 148 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 APBB3O95704 486 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 IGHV4-34P06331 123 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 CD6P30203 668 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 SCTRP47872 440 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 CLDN2P57739 230 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 ERVPABLB-1P60509 514 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 YPEL5P62699 121 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 TRAF3Q13114 568 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 NFATC4Q14934 902 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 PYCR3Q53H96 274 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 GALNT13Q8IUC8 556 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 GJD3Q8N144 294 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 TMEM145Q8NBT3 493 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 CEP70Q8NHQ1 597 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 TWIST2Q8WVJ9 160 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 C19orf60Q96EN9 201 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 UHRF1Q96T88 793 aaPredicted RBP13.75□□□□□ -0.21
SS18-201ENST00000269137 CCT7Q99832 543 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 MYOCQ99972 504 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 CCDC106Q9BWC9 280 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 ZDHHC5Q9C0B5 715 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 C6orf106Q9H6K1 298 aaPredicted RBP13.75□□□□□ -0.21
SS18-201ENST00000269137 TM7SF3Q9NS93 570 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 TXLNGQ9NUQ3 528 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 DMTF1Q9Y222 760 aa13.75□□□□□ -0.21
SS18-201ENST00000269137 PRAMEF26H0Y7S4 382 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 UNC5CO95185 931 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 ENO1P06733 434 aaKnown RBP13.74□□□□□ -0.21
SS18-201ENST00000269137 T-ENOLP0DO92 83 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 RPS9P46781 194 aaKnown RBP13.74□□□□□ -0.21
SS18-201ENST00000269137 CCNG1P51959 295 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 PTCHD3Q3KNS1 767 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 LETMD1Q6P1Q0 360 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 PJA1Q8NG27 643 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 MAGEC3Q8TD91 643 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 ATP6V1E2Q96A05 226 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 PPP1R36Q96LQ0 422 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 KCNA7Q96RP8 456 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 PKP4Q99569 1192 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 EBF2Q9HAK2 575 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 PFDN4Q9NQP4 134 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 ARMCX1Q9P291 453 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 STOX2Q9P2F5 926 aaPredicted RBP13.74□□□□□ -0.21
SS18-201ENST00000269137 SUFUQ9UMX1 484 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 E9PBE3 544 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 TNFRSF10CO14798 259 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 KLHL41O60662 606 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 OR4F21O95013 312 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 CHEK2O96017 543 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 EBLN1P0CF75 366 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 AOC1P19801 751 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 HTR1BP28222 390 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 BDKRB1P46663 353 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 CCSMST1Q4G0I0 132 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 AGTRAPQ6RW13 159 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 GCNT7Q6ZNI0 430 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 MILR1Q7Z6M3 343 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 OR4F6Q8NGB9 312 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 WDR92Q96MX6 357 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 TUBB1Q9H4B7 451 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 FGF22Q9HCT0 170 aa13.74□□□□□ -0.21
SS18-201ENST00000269137 COL6A3P12111 3177 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 IGHV1OR15-9A0A0B4J2B8 117 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 PRSS38A1L453 326 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 PIP5K1BO14986 540 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 SLC22A2O15244 555 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 HNRNPCL1O60812 293 aaKnown RBP13.73□□□□□ -0.21
SS18-201ENST00000269137 VPS4BO75351 444 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 FSBPO95073 299 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 SLC16A8O95907 504 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 ACP5P13686 325 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 EPORP19235 508 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 NCF2P19878 526 aaPredicted RBP13.73□□□□□ -0.21
SS18-201ENST00000269137 ADSLP30566 484 aaPredicted RBP13.73□□□□□ -0.21
SS18-201ENST00000269137 UBAP2LQ14157 1087 aaKnown RBP13.73□□□□□ -0.21
SS18-201ENST00000269137 NXNQ6DKJ4 435 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 CAPRIN2Q6IMN6 1127 aaKnown RBP13.73□□□□□ -0.21
SS18-201ENST00000269137 CHSY3Q70JA7 882 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 LARP4Q71RC2 724 aaKnown RBP eCLIP13.73□□□□□ -0.21
SS18-201ENST00000269137 CHST15Q7LFX5 561 aaPredicted RBP13.73□□□□□ -0.21
SS18-201ENST00000269137 ABI3BPQ7Z7G0 1075 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 TREML1Q86YW5 311 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 CAMKK1Q8N5S9 505 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 CPSF7Q8N684 471 aaKnown RBP13.73□□□□□ -0.21
SS18-201ENST00000269137 CDYL2Q8N8U2 506 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 SPDYE1Q8NFV5 336 aaPredicted RBP13.73□□□□□ -0.21
SS18-201ENST00000269137 OR9A1PQ8NGU1 263 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 OR56A3Q8NH54 315 aa13.73□□□□□ -0.21
SS18-201ENST00000269137 METTL6Q8TCB7 284 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms