RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 AHSPQ9NZD4 102 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 COMMD3Q9UBI1 195 aa11.35□□□□□ -0.59
VPS33A-201ENST00000267199 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-201ENST00000267199 FABP12A6NFH5 140 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 SLC35E2BP0CK96 405 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 CPTPQ5TA50 214 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 MACC1Q6ZN28 852 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 MINDY2Q8NBR6 621 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 C11orf24Q96F05 449 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-201ENST00000267199 DIABLOQ9NR28 239 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 SPG21Q9NZD8 308 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 VPS4AQ9UN37 437 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 SNX7Q9UNH6 387 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 ANGPT4Q9Y264 503 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 GLYATL1P3A0A0U1RQE8 302 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 A0A1B0GVM2 712 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 ILVBLA1L0T0 632 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 TCAF2A6NFQ2 919 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 ECI2O75521 394 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 CNTN5O94779 1100 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 CSF2P04141 144 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 CYP2A6P11509 494 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-201ENST00000267199 HOXA11P31270 313 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-201ENST00000267199 PLEKHG6Q3KR16 790 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 AKIRIN2Q53H80 203 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 USP43Q70EL4 1123 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 KRT78Q8N1N4 520 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 OR4A15Q8NGL6 344 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 TMEM203Q969S6 136 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 NSUN5Q96P11 429 aaKnown RBP11.34□□□□□ -0.59
VPS33A-201ENST00000267199 BBS4Q96RK4 519 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 SORT1Q99523 831 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 ACAT2Q9BWD1 397 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 MRPL17Q9NRX2 175 aaKnown RBP11.34□□□□□ -0.59
VPS33A-201ENST00000267199 NUDT4Q9NZJ9 180 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 CEPT1Q9Y6K0 416 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 LRRC14BA6NHZ5 514 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 H3BMQ9 156 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 PSKH1P11801 424 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 RPL17P18621 184 aaKnown RBP11.34□□□□□ -0.59
VPS33A-201ENST00000267199 TMBIM6P55061 237 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 FBXW4P57775 412 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 USP39Q53GS9 565 aaKnown RBP11.34□□□□□ -0.59
VPS33A-201ENST00000267199 SETMARQ53H47 684 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-201ENST00000267199 SULT1C3Q6IMI6 304 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 GPRIN1Q7Z2K8 1008 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 CEP97Q8IW35 865 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 CMTR2Q8IYT2 770 aaKnown RBP11.34□□□□□ -0.59
VPS33A-201ENST00000267199 NPWQ8N729 165 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 GRPEL2Q8TAA5 225 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 LRRC20Q8TCA0 184 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 KBTBD7Q8WVZ9 684 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 COG8Q96MW5 612 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 IL4I1Q96RQ9 567 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 NMUR1Q9HB89 426 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 MAP4K5Q9Y4K4 846 aa11.34□□□□□ -0.59
VPS33A-201ENST00000267199 GLTPD2A6NH11 291 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 BHMG1C9JSJ3 638 aaPredicted RBP11.33□□□□□ -0.6
VPS33A-201ENST00000267199 ESR1P03372 595 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 OPN1SWP03999 348 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 FAM163BP0C2L3 166 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 G6PDP11413 515 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 TIE1P35590 1138 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 CACNG1Q06432 222 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 C6orf141Q5SZD1 244 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 FUT10Q6P4F1 479 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 C14orf80Q86SX3 495 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 PHACTR4Q8IZ21 702 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 TRUB1Q8WWH5 349 aaKnown RBP11.33□□□□□ -0.6
VPS33A-201ENST00000267199 FUBP3Q96I24 572 aaKnown RBP eCLIP11.33□□□□□ -0.6
VPS33A-201ENST00000267199 FUNDC2Q9BWH2 189 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 NUSAP1Q9BXS6 441 aaKnown RBP11.33□□□□□ -0.6
VPS33A-201ENST00000267199 ZCCHC2Q9C0B9 1178 aaKnown RBP11.33□□□□□ -0.6
VPS33A-201ENST00000267199 SMOC2Q9H3U7 446 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 CCDC59Q9P031 241 aaKnown RBP11.33□□□□□ -0.6
VPS33A-201ENST00000267199 MAPRE3Q9UPY8 281 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 ARVCFO00192 962 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 STX11O75558 287 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 DHFRP00374 187 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 IL1BP01584 269 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 CDH4P55283 916 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 NANOGP8Q6NSW7 305 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 RGMBQ6NW40 437 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 SERPINA9Q86WD7 417 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 SNX29P2Q8IUI4 249 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 SCML4Q8N228 414 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 C7orf57Q8NEG2 295 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 POF1BQ8WVV4 589 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 ATL1Q8WXF7 558 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 PIK3R3Q92569 461 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 SLC45A3Q96JT2 553 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 NANOGQ9H9S0 305 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 MCUBQ9NWR8 336 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 FCF1Q9Y324 198 aaKnown RBP11.33□□□□□ -0.6
VPS33A-201ENST00000267199 AHDC1Q5TGY3 1603 aaPredicted RBP11.33□□□□□ -0.6
VPS33A-201ENST00000267199 NR2F1P10589 423 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 HOXD12P35452 270 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 RPIAP49247 311 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 HLCSP50747 726 aa11.33□□□□□ -0.6
VPS33A-201ENST00000267199 ACLYP53396 1101 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms