RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 CRTC3Q6UUV7 619 aa22.14■■□□□ 1.13
MCF2L-201ENST00000261963 LEMD2Q8NC56 503 aa22.14■■□□□ 1.13
MCF2L-201ENST00000261963 SLAIN1Q8ND83 568 aa22.14■■□□□ 1.13
MCF2L-201ENST00000261963 METTL6Q8TCB7 284 aa22.14■■□□□ 1.13
MCF2L-201ENST00000261963 ACTL8Q9H568 366 aa22.14■■□□□ 1.13
MCF2L-201ENST00000261963 HEBP1Q9NRV9 189 aa22.14■■□□□ 1.13
MCF2L-201ENST00000261963 USP22Q9UPT9 525 aa22.14■■□□□ 1.13
MCF2L-201ENST00000261963 NCK1P16333 377 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 ITGB6P18564 788 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 GSTM2P28161 218 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 CASP2P42575 452 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 PPP3CCP48454 512 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 SELENBP1Q13228 472 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 AQP6Q13520 282 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 CDH18Q13634 790 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 SF3B4Q15427 424 aaKnown RBP eCLIP22.13■■□□□ 1.131e-9■■□□□ 13.7
MCF2L-201ENST00000261963 PTRHD1Q6GMV3 140 aaKnown RBP22.13■■□□□ 1.13
MCF2L-201ENST00000261963 PIWIL3Q7Z3Z3 882 aaKnown RBP22.13■■□□□ 1.13
MCF2L-201ENST00000261963 ZFAND4Q86XD8 727 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 ARL14EPQ8N8R7 260 aaPredicted RBP22.13■■□□□ 1.13
MCF2L-201ENST00000261963 OR4F6Q8NGB9 312 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 KCTD14Q9BQ13 255 aaPredicted RBP22.13■■□□□ 1.13
MCF2L-201ENST00000261963 CFHR5Q9BXR6 569 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 NDEL1Q9GZM8 345 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 EVLQ9UI08 416 aaPredicted RBP22.13■■□□□ 1.13
MCF2L-201ENST00000261963 ATP11BQ9Y2G3 1177 aa22.13■■□□□ 1.13
MCF2L-201ENST00000261963 INPP4BO15327 924 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 FFAR2O15552 330 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 RSL1D1O76021 490 aaKnown RBP22.12■■□□□ 1.13
MCF2L-201ENST00000261963 RPS3P23396 243 aaKnown RBP eCLIP22.12■■□□□ 1.13
MCF2L-201ENST00000261963 GKP32189 559 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 DNASE1L3Q13609 305 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 GTF2H2Q13888 395 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 GTF2H2CQ6P1K8 395 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 IL27RAQ6UWB1 636 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 CAPNS2Q96L46 248 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 FUNDC2Q9BWH2 189 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 CLPBQ9H078 707 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 MUC13Q9H3R2 512 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 ELOVL2Q9NXB9 296 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 TNPO3Q9Y5L0 923 aaKnown RBP22.12■■□□□ 1.13
MCF2L-201ENST00000261963 PLXNA4Q9HCM2 1894 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 TYW5A2RUC4 315 aaKnown RBP22.12■■□□□ 1.13
MCF2L-201ENST00000261963 CNPP09543 421 aaKnown RBP22.12■■□□□ 1.13
MCF2L-201ENST00000261963 ZNF7P17097 686 aaPredicted RBP22.12■■□□□ 1.13
MCF2L-201ENST00000261963 NEK2P51955 445 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 EEFSECP57772 596 aaKnown RBP22.12■■□□□ 1.13
MCF2L-201ENST00000261963 IFITM3Q01628 133 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 TRAF3Q13114 568 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 CBX2Q14781 532 aaPredicted RBP22.12■■□□□ 1.13
MCF2L-201ENST00000261963 INAVAQ3KP66 663 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 TXNDC8Q6A555 127 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 CLDN19Q8N6F1 224 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 NUDT8Q8WV74 236 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 NSUN3Q9H649 340 aaKnown RBP22.12■■□□□ 1.13
MCF2L-201ENST00000261963 IL26Q9NPH9 171 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 TMEM45AQ9NWC5 275 aa22.12■■□□□ 1.13
MCF2L-201ENST00000261963 NDUFB5O43674 189 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 LDLRP01130 860 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 SOX11P35716 441 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 ARL1P40616 181 aaPredicted RBP22.11■■□□□ 1.13
MCF2L-201ENST00000261963 TPTEP56180 551 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 CDKN3Q16667 212 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 SNX29P2Q8IUI4 249 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 TBC1D21Q8IYX1 336 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 FKBP10Q96AY3 582 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 ISG20Q96AZ6 181 aaKnown RBP22.11■■□□□ 1.13
MCF2L-201ENST00000261963 RMND5AQ9H871 391 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 ZFYVE1Q9HBF4 777 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 IFT52Q9Y366 437 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 COL4A6Q14031 1691 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 PRRG1O14668 218 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 TAPBPO15533 448 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 TRBC1P01850 177 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 G6PDP11413 515 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 PRKG2Q13237 762 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 NFATC2Q13469 925 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 ADNPQ9H2P0 1102 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 ASB8Q9H765 288 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 IL21Q9HBE4 155 aa22.11■■□□□ 1.13
MCF2L-201ENST00000261963 ANKRD28O15084 1053 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 KATNA1O75449 491 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 GLUD1P00367 558 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 TCEA1P23193 301 aaKnown RBP22.1■■□□□ 1.13
MCF2L-201ENST00000261963 EMX2Q04743 252 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 ABRAXAS2Q15018 415 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 FXNQ16595 210 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 AAK1Q2M2I8 961 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 HABP4Q5JVS0 413 aaKnown RBP22.1■■□□□ 1.13
MCF2L-201ENST00000261963 RBM48Q5RL73 367 aaKnown RBP22.1■■□□□ 1.13
MCF2L-201ENST00000261963 PLEKHG7Q6ZR37 379 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 SNX20Q7Z614 316 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 SPARTQ8N0X7 666 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 DPP10Q8N608 796 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 VMP1Q96GC9 406 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 C17orf80Q9BSJ5 609 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 ATP13A3Q9H7F0 1226 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 IPPKQ9H8X2 491 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 ZNF639Q9UID6 485 aa22.1■■□□□ 1.13
MCF2L-201ENST00000261963 TRBV5-4A0A0C4DH59 114 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms