RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 LATS2Q9NRM7 1088 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 C5AR2Q9P296 337 aa13.38□□□□□ -0.27
DDX39A-201ENST00000242776 NFKBIL1Q9UBC1 381 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-201ENST00000242776 PTRH2Q9Y3E5 179 aaKnown RBP13.38□□□□□ -0.27
DDX39A-201ENST00000242776 CTAGE15A4D2H0 777 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 PRSS44E7EML9 344 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 ZNF749O43361 778 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 ALOX12BO75342 701 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 NDST3O95803 873 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 CTAGE8P0CG41 777 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 ST6GAL1P15907 406 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 IFI35P80217 286 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-201ENST00000242776 PTPRCAPQ14761 206 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 PRKD1Q15139 912 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-201ENST00000242776 HIF1AQ16665 826 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 ZNF789Q5FWF6 425 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 GPRC6AQ5T6X5 926 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 CTAGE6Q86UF2 777 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 MCEMP1Q8IX19 187 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 CTAGE4Q8IX94 777 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 GALNT16Q8N428 558 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 LILRA3Q8N6C8 439 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-201ENST00000242776 BRSK1Q8TDC3 778 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 DOCK10Q96BY6 2186 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 FAM118BQ9BPY3 351 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 ZNF552Q9H707 407 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-201ENST00000242776 GPN3Q9UHW5 284 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-201ENST00000242776 FEZ2Q9UHY8 353 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-201ENST00000242776 ZNF148Q9UQR1 794 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 BTRCQ9Y297 605 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 POLQO75417 2590 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 FBN2P35556 2912 aa13.37□□□□□ -0.27
DDX39A-201ENST00000242776 PEX12O00623 359 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 ALPPP05187 535 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 SLC35G4P0C7Q5 338 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 CBSLP0DN79 551 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 AGXTP21549 392 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 CBSP35520 551 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 SPAM1P38567 509 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 CHRNA4P43681 627 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 DMPKQ09013 629 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 SNX1Q13596 522 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 MYBPC3Q14896 1274 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 OASLQ15646 514 aaKnown RBP13.36□□□□□ -0.27
DDX39A-201ENST00000242776 METRNLQ641Q3 311 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 CCDC137Q6PK04 289 aaKnown RBP13.36□□□□□ -0.27
DDX39A-201ENST00000242776 SLC34A3Q8N130 599 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 SPATA4Q8NEY3 305 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 BLOC1S5Q8TDH9 187 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 RMDN2Q96LZ7 410 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 VAT1Q99536 393 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 ZCCHC2Q9C0B9 1178 aaKnown RBP13.36□□□□□ -0.27
DDX39A-201ENST00000242776 KIR3DX1Q9H7L2 352 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 AGPAT4Q9NRZ5 378 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 SERTAD3Q9UJW9 196 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 POMT2Q9UKY4 750 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 DRG1Q9Y295 367 aaKnown RBP13.36□□□□□ -0.27
DDX39A-201ENST00000242776 PADI2Q9Y2J8 665 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 PCDHGA10Q9Y5H3 936 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 NUP210LQ5VU65 1888 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 ANKRD12Q6UB98 2062 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 GLYATL1P3A0A0U1RQE8 302 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 E7EQ34 232 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 KCNN4O15554 427 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 KCNJ13O60928 360 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 SNRPB2P08579 225 aaKnown RBP13.36□□□□□ -0.27
DDX39A-201ENST00000242776 MSH3P20585 1137 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 RBL1P28749 1068 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 STIP1P31948 543 aaKnown RBP13.36□□□□□ -0.27
DDX39A-201ENST00000242776 COILP38432 576 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-201ENST00000242776 FOLR3P41439 243 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 RIPPLY3P57055 190 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 C2orf54Q08AI8 447 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 DEFB110Q30KQ9 67 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 DCAF10Q5QP82 559 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 LDLRAP1Q5SW96 308 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 GSTA5Q7RTV2 222 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 FJX1Q86VR8 437 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 KCNMB4Q86W47 210 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 N4BP2L2Q92802 583 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-201ENST00000242776 CNDP1Q96KN2 507 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 FER1L6-AS2Q96M78 137 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 FERD3LQ96RJ6 166 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 TMEM121Q9BTD3 319 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 DDX47Q9H0S4 455 aaKnown RBP13.36□□□□□ -0.27
DDX39A-201ENST00000242776 SLC25A51Q9H1U9 297 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 SRMSQ9H3Y6 488 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 L2HGDHQ9H9P8 463 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 GLOD4Q9HC38 313 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 P4HTMQ9NXG6 502 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 ITGB1BP2Q9UKP3 347 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 CDYLQ9Y232 598 aa13.36□□□□□ -0.27
DDX39A-201ENST00000242776 APCP25054 2843 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 MYO7BQ6PIF6 2116 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 OTOGQ6ZRI0 2925 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 POLEQ07864 2286 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 GAS8O95995 478 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 ITGA3P26006 1051 aa13.35□□□□□ -0.27
DDX39A-201ENST00000242776 PRDX3P30048 256 aaKnown RBP13.35□□□□□ -0.27
DDX39A-201ENST00000242776 ZRSR2Q15696 482 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms