RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CD180Q99467 661 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 FMO2Q99518 471 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 RAB33BQ9H082 229 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 SRMSQ9H3Y6 488 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 TFB2MQ9H5Q4 396 aaKnown RBP10.98□□□□□ -0.65
SF3B6-201ENST00000233468 L2HGDHQ9H9P8 463 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 RDH14Q9HBH5 336 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 MOCS1Q9NZB8 636 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 EPHA6Q9UF33 1036 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 SLC24A2Q9UI40 661 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 TRMT6Q9UJA5 497 aaKnown RBP10.98□□□□□ -0.65
SF3B6-201ENST00000233468 ATXN7L1Q9ULK2 861 aaPredicted RBP10.98□□□□□ -0.65
SF3B6-201ENST00000233468 ENTPD2Q9Y5L3 495 aa10.98□□□□□ -0.65
SF3B6-201ENST00000233468 ATXN7O15265 892 aaPredicted RBP10.97□□□□□ -0.65
SF3B6-201ENST00000233468 NIPSNAP2O75323 286 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 JMJD7P0C870 316 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 TYRP1P17643 537 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 CD9P21926 228 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 ACADLP28330 430 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 SHMT2P34897 504 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 LSSP48449 732 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 RGS4P49798 205 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 CSE1LP55060 971 aaKnown RBP10.97□□□□□ -0.65
SF3B6-201ENST00000233468 MPP1Q00013 466 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 SLMAPQ14BN4 828 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 FASTKD3Q14CZ7 662 aaKnown RBP10.97□□□□□ -0.65
SF3B6-201ENST00000233468 TMEM164Q5U3C3 297 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 FAM45BPQ6NSW5 357 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 LRRC69Q6ZNQ3 347 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 MICALCLQ6ZW33 695 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 RAB11FIP2Q7L804 512 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 AMIGO1Q86WK6 493 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 SLITRK4Q8IW52 837 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 DCUN1D3Q8IWE4 304 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 CARFQ8N187 725 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 FBXO39Q8N4B4 442 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 AGBL5Q8NDL9 886 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 SNIP1Q8TAD8 396 aaKnown RBP10.97□□□□□ -0.65
SF3B6-201ENST00000233468 FAM45AQ8TCE6 357 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 FGF11Q92914 225 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 ATXN7L3BQ96GX2 97 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 VPS39Q96JC1 886 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 NUDT22Q9BRQ3 303 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 AARSD1Q9BTE6 412 aaKnown RBP10.97□□□□□ -0.65
SF3B6-201ENST00000233468 RAB11FIP5Q9BXF6 653 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 POLR1BQ9H9Y6 1135 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 ZDHHC18Q9NUE0 388 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 HRASLS2Q9NWW9 162 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 PDP2Q9P2J9 529 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 DMGDHQ9UI17 866 aaKnown RBP10.97□□□□□ -0.65
SF3B6-201ENST00000233468 DHRS7Q9Y394 339 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 PCDHGA8Q9Y5G5 932 aa10.97□□□□□ -0.65
SF3B6-201ENST00000233468 MN1Q10571 1320 aaPredicted RBP10.96□□□□□ -0.65
SF3B6-201ENST00000233468 IGHV5-10-1A0A0J9YXX1 117 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 PABPN1LA6NDY0 278 aaKnown RBP10.96□□□□□ -0.65
SF3B6-201ENST00000233468 OR5K3A6NET4 321 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 PLD2O14939 933 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 CAPN5O15484 640 aaPredicted RBP10.96□□□□□ -0.65
SF3B6-201ENST00000233468 RRP8O43159 456 aaKnown RBP10.96□□□□□ -0.65
SF3B6-201ENST00000233468 RASSF9O75901 435 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 AHSGP02765 367 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 ANKRD34CP0C6C1 535 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 THRAP10827 490 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 MAP4P27816 1152 aaKnown RBP10.96□□□□□ -0.65
SF3B6-201ENST00000233468 ARL4DP49703 201 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 CLCN7P51798 805 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 SLC12A2P55011 1212 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 GABREP78334 506 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 TLE3Q04726 772 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 C19orf57Q0VDD7 668 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 ABRQ12979 859 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 NAB1Q13506 487 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 ZNF789Q5FWF6 425 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 IRGCQ6NXR0 463 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 DUS1LQ6P1R4 473 aaKnown RBP10.96□□□□□ -0.65
SF3B6-201ENST00000233468 TRMT10BQ6PF06 316 aaKnown RBP10.96□□□□□ -0.65
SF3B6-201ENST00000233468 CNSTQ6PJW8 725 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 XKR5Q6UX68 686 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 NAPRTQ6XQN6 538 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 STRA8Q7Z7C7 330 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 RELL1Q8IUW5 271 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 SPACA3Q8IXA5 215 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 UNC5BQ8IZJ1 945 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 GPATCH11Q8N954 259 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 OR4E2Q8NGC2 313 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 OR52E1Q8NGJ3 308 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 CFAP61Q8NHU2 1237 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 LKAAEAR1Q8TD35 194 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 UBXN4Q92575 508 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 RAD51AP1Q96B01 352 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 SLC22A18Q96BI1 424 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 C9orf72Q96LT7 481 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 CCDC74BQ96LY2 380 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 CPNE1Q99829 537 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 WDR83Q9BRX9 315 aaKnown RBP10.96□□□□□ -0.65
SF3B6-201ENST00000233468 HGH1Q9BTY7 390 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 THSD1Q9NS62 852 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 OR6C2Q9NZP2 312 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 LNPEPQ9UIQ6 1025 aa10.96□□□□□ -0.65
SF3B6-201ENST00000233468 SLC39A10Q9ULF5 831 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms