RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 ANGPT4Q9Y264 503 aa12.85□□□□□ -0.35
HDAC7-201ENST00000080059 RUVBL1Q9Y265 456 aaKnown RBP12.85□□□□□ -0.35
HDAC7-201ENST00000080059 RWDD3Q9Y3V2 267 aa12.85□□□□□ -0.35
HDAC7-201ENST00000080059 GSAPA4D1B5 854 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 CXCR6O00574 342 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 MMP20O60882 483 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 CHRM1P11229 460 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 HPGDP15428 266 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 ATF6P18850 670 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 PGFP49763 221 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 ST13P50502 369 aaKnown RBP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 SPIBQ01892 262 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 TYW3Q6IPR3 259 aaKnown RBP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 TSPAN33Q86UF1 283 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 C10orf53Q8N6V4 93 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 ENDOVQ8N8Q3 282 aaKnown RBP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 OR52J3Q8NH60 311 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 PTERQ96BW5 349 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 SLC39A13Q96H72 371 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 MGME1Q9BQP7 344 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 BOCQ9BWV1 1114 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 CEP44Q9C0F1 390 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 KLHL20Q9Y2M5 609 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 AQP12BA6NM10 295 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 hCG_2039718K7EN88 272 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 LIN7AO14910 233 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 SERPINI2O75830 405 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 PPIBP23284 216 aaKnown RBP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 MAGEA3P43357 314 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 SEMA3BQ13214 749 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 MBOAT1Q6ZNC8 495 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 AMZ2Q86W34 360 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 AQP12AQ8IXF9 295 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 SCML4Q8N228 414 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 SVOPQ8N4V2 548 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 OR10Q1Q8NGQ4 319 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 ARRDC2Q8TBH0 407 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 UTP4Q969X6 686 aaKnown RBP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 EXOSC8Q96B26 276 aaKnown RBP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 VPS35Q96QK1 796 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 POPDC3Q9HBV1 291 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 EURLQ9NYK6 297 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 VPS29Q9UBQ0 182 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 COL11A2P13942 1736 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 MAGEB17A8MXT2 336 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 GRID2O43424 1007 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 BCAS2O75934 225 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 PGRP06401 933 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 TNNI3P19429 210 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 IDSP22304 550 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 FDXRP22570 491 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 GABRB3P28472 473 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 TTKP33981 857 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 PLA2G16P53816 162 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 AP1S2P56377 157 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 NTHL1P78549 312 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 TRAP1Q12931 704 aaKnown RBP12.84□□□□□ -0.35
HDAC7-201ENST00000080059 GPAT3Q53EU6 434 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 KCTD11Q693B1 232 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 OR4F3Q6IEY1 312 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 SYVN1Q86TM6 617 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 BPIFB1Q8TDL5 484 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 ZSCAN5AQ9BUG6 496 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 MUC13Q9H3R2 512 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 IKZF3Q9UKT9 509 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 CORO2BQ9UQ03 480 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 PRKAB1Q9Y478 270 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 LOXHD1Q8IVV2 1947 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 BRWD3Q6RI45 1802 aa12.84□□□□□ -0.35
HDAC7-201ENST00000080059 SORBS2O94875 1100 aaKnown RBP12.83□□□□□ -0.35
HDAC7-201ENST00000080059 THRBP10828 461 aa12.83□□□□□ -0.35
HDAC7-201ENST00000080059 RXRGP48443 463 aa12.83□□□□□ -0.35
HDAC7-201ENST00000080059 PRKCQQ04759 706 aa12.83□□□□□ -0.35
HDAC7-201ENST00000080059 SEMA3AQ14563 771 aa12.83□□□□□ -0.35
HDAC7-201ENST00000080059 OR13J1Q8NGT2 312 aa12.83□□□□□ -0.35
HDAC7-201ENST00000080059 SPHK2Q9NRA0 654 aa12.83□□□□□ -0.35
HDAC7-201ENST00000080059 ZIM2Q9NZV7 527 aa12.83□□□□□ -0.35
HDAC7-201ENST00000080059 SUCOQ9UBS9 1254 aaKnown RBP12.83□□□□□ -0.35
HDAC7-201ENST00000080059 SLC27A6Q9Y2P4 619 aa12.83□□□□□ -0.35
HDAC7-201ENST00000080059 LOC100506127A0A0U1RQW1 187 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 PPP6CO00743 305 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 TNFRSF10BO14763 440 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 PI15O43692 258 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 POP7O75817 140 aaKnown RBP12.83□□□□□ -0.36
HDAC7-201ENST00000080059 VIPR1P32241 457 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 ETV3P41162 512 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 MAPK12P53778 367 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 ZNF783Q6ZMS7 281 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 ZFYVE19Q96K21 471 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 AASDHPPTQ9NRN7 309 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 TREX1Q9NSU2 369 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 PDP1Q9P0J1 537 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-201ENST00000080059 SNTNA6NMZ2 147 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 OR1F1O43749 312 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 OR10H3O60404 316 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 RPL10P27635 214 aaKnown RBP12.83□□□□□ -0.36
HDAC7-201ENST00000080059 KRT20P35900 424 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 ATP13A5Q4VNC0 1218 aa12.83□□□□□ -0.36
HDAC7-201ENST00000080059 C9orf64Q5T6V5 341 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms