RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Sgpl1Q8R0X7 568 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 H2afjQ8R1M2 129 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Q8R3C1 574 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 TipinQ91WA1 278 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fig4Q91WF7 907 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 NgrnQ99KS2 293 aaKnown RBP9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dnttip1Q99LB0 328 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mrps24Q9CQV5 167 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fam83dQ9D7I8 585 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Entpd4Q9DBT4 613 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Fbxl12Q9EPX5 326 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Bin3Q9JI08 253 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ak1Q9R0Y5 194 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Lypla2Q9WTL7 231 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Umodl1Q5DID3 1319 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Disp2Q8CIP5 1345 aa9.57□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Thsd7aQ69ZU6 1645 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Btbd35f23A0A0R4J2B9 498 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm45713A0A1B0GS68 446 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zfp982A2A8Q4 368 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Hbb-bh2B2RVB7 147 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 8030474K03RikE9Q4Y8 554 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm8897L7N294 181 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 PdgfrbP05622 1098 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Itgb1P09055 798 aaKnown RBP9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 BgnP28653 369 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Sephs2P97364 452 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Prelid2Q0VBB0 177 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zfp935Q14DI0 353 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Olfr616Q3KPB0 317 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Alg6Q3TAE8 507 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Xxylt1Q3U4G3 392 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Sez6l2Q4V9Z5 910 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Trcg1Q58Y74 825 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 MuskQ61006 868 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dag1Q62165 893 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Zfp82Q6P9Y7 530 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 SvoplQ6PDF3 494 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 WtipQ7TQJ8 398 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rap2aQ80ZJ1 183 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rbms3Q8BWL5 431 aaKnown RBP9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Pithd1Q8BWR2 211 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mblac1Q8BWY4 260 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Strip1Q8C079 837 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vps26bQ8C0E2 336 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Slco6c1Q8C0X7 706 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Kct2Q8K201 259 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mtmr4Q91XS1 1190 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Asb7Q91ZU0 318 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Syt12Q920N7 421 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Smim11aQ99J19 55 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Map4k3Q99JP0 894 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Snx29Q9D3S3 818 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Hspb11Q9D6H2 143 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Spock2Q9ER58 423 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Il22bQ9JJY8 179 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Krt6bQ9Z331 562 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 H2-T24F8VQG4 363 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vmn2r19G5E8G4 854 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Gm3248K7N721 186 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vmn2r57L7N269 863 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tulp3O88413 460 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tcf3P15806 651 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cox5bP19536 128 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Adrb1P34971 466 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Atp5jP97450 108 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 FhP97807 507 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ankdd1bQ14DN9 521 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Myl12bQ3THE2 172 aaKnown RBP9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 KhsrpQ3U0V1 748 aaKnown RBP9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Mrgprx2Q3UG50 352 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Slc26a10Q5EBI0 492 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Myl12aQ6ZWQ9 172 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vgll2Q8BGW8 322 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ppp1r3eQ8BRJ4 279 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Arhgap12Q8C0D4 838 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Bbs4Q8C1Z7 520 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Trnt1Q8K1J6 434 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 CrygnQ8VHL5 183 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Rab14Q91V41 215 aaKnown RBP9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Pcdha11Q91Y19 950 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Coa7Q921H9 231 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Ndufa10Q99LC3 355 aaKnown RBP9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Pwp1Q99LL5 501 aaKnown RBP9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Chmp1b1Q99LU0 199 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Adgrf4Q9D2L6 698 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Adam25Q9R159 760 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Adamtsl3G3UXC7 1706 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Chd5A2A8L1 1946 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tp53bp1P70399 1969 aa9.56□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Trbc2A0A075B5J4 173 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Trbc1A0A0A6YWV4 173 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Tex264E9Q137 309 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vmn2r80E9Q1L0 863 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Cyp4f17G3UW78 524 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Vmn2r1O70410 912 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Dhcr7O88455 471 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Hoxb8P09632 243 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 SpnP15702 395 aa9.55□□□□□ -0.88
Hmgb1-201ENSMUST00000085546 Glb1P23780 647 aa9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms