RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gm3183D3YUJ6 481 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm3139J3QK78 481 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Gm3106J3QPH3 481 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Hsd17b10O08756 261 aaKnown RBP16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 PpibP24369 216 aaKnown RBP16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 LdlrP35951 862 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 ItgavP43406 1044 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc22a23Q3UHH2 689 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ccser2Q3UHI0 833 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Marveld2Q3UZP0 555 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Amigo1Q80ZD8 492 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Coro2bQ8BH44 480 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc9a4Q8BUE1 797 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Tfb1mQ8JZM0 345 aaKnown RBP16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Atad1Q9D5T0 361 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ap1m2Q9WVP1 423 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Htatip2Q9Z2G9 242 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 AU018091E9PWS4 684 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 P01740 135 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Dnaja1P63037 397 aaKnown RBP16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ubtfl1Q3USZ2 394 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Prdm4Q80V63 803 aa16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Alg13Q9D8C3 1166 aaKnown RBP16.34■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Cntnap2Q9CPW0 1332 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Scn2aA0A0J9YTW6 2006 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Pbx3O35317 434 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ppm1bP36993 390 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Mxd1P50538 227 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Pdp1Q3UV70 538 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Foxd1Q61345 456 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc3a1Q91WV7 685 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Oser1Q9D722 291 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Ankle1A8VU90 534 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 AxlQ00993 888 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Slc6a3Q61327 619 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Prkg2Q61410 762 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 CcncQ62447 283 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Sgpl1Q8R0X7 568 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Olfr606Q8VGZ8 319 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Chrna6Q9R0W9 494 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Dock11A2AF47 2073 aa16.33■□□□□ 0.21
Ccdc88a-201ENSMUST00000040182 Plce1Q8K4S1 2282 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Aknad1E9Q8N6 675 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Defa14P50712 85 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Csn1s2aQ02862 184 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Qsox2Q3TMX7 692 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Clcn4Q61418 747 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Jak2Q62120 1129 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Adam6bQ6IMH7 756 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 MogsQ80UM7 834 aaKnown RBP16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fam76bQ80XP8 339 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Adgrg7Q8BM96 785 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 TescQ9JKL5 214 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Itga10E9Q6R1 1167 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Rab11fip2G3XA57 512 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Banf1O54962 89 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Mab21l1O70299 359 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ggta1P23336 394 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Acvr2bP27040 536 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Asgr1P34927 284 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Mettl6Q8BVH9 282 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Olfr683Q8VGV1 319 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 SelenomQ8VHC3 145 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Copz2Q9JHH9 205 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fam181aJ3QNB7 292 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Zfp28P10078 825 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Lhx1P63006 406 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Atp5a1Q03265 553 aaKnown RBP16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Styk1Q6J9G1 429 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tm7sf2Q71KT5 418 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Serpinb11Q9CQV3 388 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Armc1Q9D7A8 282 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Arfgap1Q9EPJ9 414 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 PigqQ9QYT7 581 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Flt3Q00342 1000 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Sema4aQ62178 760 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 PeloQ80X73 385 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Rab9bQ8BHH2 201 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Galnt13Q8CF93 556 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fars2Q99M01 451 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm45208A0A140LJ36 292 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm6685D3YYP3 228 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Atxn1P54254 791 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Fam129bQ8R1F1 749 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Olfr808Q8VGI8 312 aa16.33■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Qser1A2BIE1 1698 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Klhdc7aA2APT9 773 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cdk14O35495 469 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Cyp4a14O35728 507 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Hcn1O88704 910 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Ddx51Q6P9R1 639 aaKnown RBP16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Faim2Q8K097 317 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Slc44a4Q91VA1 707 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 CmasQ99KK2 432 aaKnown RBP16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 HalP35492 657 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Kctd15Q8K0E1 283 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Akr1a1Q9JII6 325 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm5565A0A0G2JGB2 317 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Tmem236A2ARJ3 344 aa16.32■□□□□ 0.2
Ccdc88a-201ENSMUST00000040182 Gm8229K7N749 213 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms