RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Zfp623Q9CY99 499 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Glipr1l1Q9DAG6 236 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Dnajb2Q9QYI5 324 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Lcn5A2AJB7 192 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Fam151bD3YUE4 279 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm10717D3Z1I8 228 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm11239E9Q5Z9 360 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm11237F2Z3W5 360 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm11238F2Z478 360 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm8334F7CD45 553 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm20503G3UZK1 150 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Rundc3aO08576 446 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Limk2O54785 638 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mup3P04939 184 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 JunbP09450 344 aaKnown RBP9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Srp54P14576 504 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Capza2P47754 286 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gad2P48320 585 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Aff3P51827 1254 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Hdac2P70288 488 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Khdc4Q3TCX3 612 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm428Q3UTE2 360 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Cyp4b1Q64462 511 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 PapolgQ6PCL9 739 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr813Q7TRH5 310 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Thnsl2Q80W22 483 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Slc39a9Q8BFU1 308 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Zfp719Q8BIV1 735 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Isoc1Q91V64 297 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Cyp4f13Q99N19 523 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Plin3Q9DBG5 437 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Chrna6Q9R0W9 494 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Nfs1Q9Z1J3 459 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ly75Q60767 1723 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Klhdc7bA0A286YD60 1263 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mageb4A2A9R3 556 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Znf382B2RXC5 579 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr731F8VQB9 326 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Clk4O35493 481 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Cyp2b19O55071 492 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ptpn20O55082 426 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Chrna4O70174 629 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Grik2P39087 908 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Rps14P62264 151 aaKnown RBP9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 B3gnt3Q5JCS9 372 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 CltbQ6IRU5 229 aaKnown RBP9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Cfap97Q6ZPR1 541 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 PstkQ8BP74 359 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Slc45a3Q8K0H7 553 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Traf3ip2Q8N7N6 555 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Rbms2Q8VC70 383 aaKnown RBP9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Tmem246Q91YV9 403 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Clstn3Q99JH7 956 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 QpctQ9CYK2 362 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Prorsd1Q9D820 169 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mcemp1Q9D8U6 183 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Slc22a4Q9Z306 553 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ecm29Q6PDI5 1840 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Fbxo47A2A6H3 451 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm13040A2A8C4 496 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 CercamA3KGW5 592 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Wdr95D3Z7A8 784 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gm6614M0QWR8 670 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Bub1O08901 1058 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ifngr1P15261 477 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 St14P56677 855 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 ErfP70459 551 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Hsd3b5Q61694 373 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Phf24Q80TL4 400 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 GskipQ8BGR8 139 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Slc9a7Q8BLV3 726 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Coq9Q8K1Z0 313 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Atp13a2Q9CTG6 1169 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Clec2gQ9D676 269 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Mkrn2Q9ERV1 416 aaKnown RBP9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Inpp5eQ9JII1 647 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Scamp5Q9JKD3 235 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Itgb6Q9Z0T9 787 aa9.76□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Znf536Q8K083 1302 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Rdh8D3Z6W3 317 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Klhl3E0CZ16 587 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 H2-T24F8VQG4 363 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Dnaja1P63037 397 aaKnown RBP9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Bop1P97452 732 aaKnown RBP9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 StimateQ3UF25 288 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Cntn2Q61330 1040 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ndrg1Q62433 394 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 A4galtQ67BJ4 359 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Fads6Q80UG1 342 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Serpina3fQ80X76 445 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Casp9Q8C3Q9 454 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Olfr665Q8VG79 316 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 MvdQ99JF5 401 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Gkn2Q9CQS6 184 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Hspb11Q9D6H2 143 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 UqcrbQ9D855 111 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Bpifa3Q9D9J8 232 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ndst3Q9EQH7 873 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Myh11O08638 1972 aa9.75□□□□□ -0.85
Ldlr-201ENSMUST00000034713 Ddi2A2ADY9 399 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms