RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Pramel1Q99MW3 458 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Mad2l1Q9Z1B5 205 aa16.12■□□□□ 0.17
Shh-201ENSMUST00000002708 Spin2gA0A0N4SW15 236 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Pramef20B1ARV6 477 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Gabrr3B2RXA8 464 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Spin2eJ3QNQ0 234 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 PigfO09101 219 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Lrrc23O35125 340 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Ech1O35459 327 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Fv4P11370 679 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Ptger3P30557 365 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Kcnj2P35561 428 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Nr5a2P45448 560 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Sox2P48432 319 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Arl1P61211 181 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Dusp2Q05922 318 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Armc7Q3UJZ3 198 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Hephl1Q3V1H3 1159 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Slc23a3Q60850 611 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Slc25a23Q6GQS1 467 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Slc16a12Q8BGC3 486 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Brd8Q8R3B7 951 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Fastkd2Q922E6 689 aaKnown RBP16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Mta3Q924K8 591 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Fcf1Q9CTH6 198 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 GatmQ9D964 423 aaKnown RBP16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Prokr1Q9JKL1 393 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Vmn2r31L7N1Z4 861 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 PbsnO08976 174 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Prdx3P20108 257 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Gucy1b2Q8BXH3 824 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 1700020N01RikQ8CF20 87 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Glis1Q8K1M4 789 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 BroxQ8K2Q7 411 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Plpp3Q99JY8 312 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Cryl1Q99KP3 319 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Fars2Q99M01 451 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Mrps18bQ99N84 254 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Atp13a2Q9CTG6 1169 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Nectin1Q9JKF6 515 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Vmn1r49Q9WUF1 310 aa16.11■□□□□ 0.17
Shh-201ENSMUST00000002708 Faap100A2ACJ2 879 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Gbp4A4UUI3 631 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Cylc2B1AWN8 422 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 H2-M9O19442 342 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 AprtP08030 180 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Btbd1P58544 488 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Ms4a15Q3UPL6 245 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Srek1ip1Q4V9W2 153 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Susd6Q8BGE4 302 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Abi3Q8BYZ1 367 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Kdelr3Q8R1L4 214 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Cers2Q924Z4 380 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Themis3Q9CU24 569 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 TrmuQ9DAT5 417 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Yae1d1Q9DAY6 216 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Rpl38Q9JJI8 70 aaKnown RBP16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Tas2r119Q9JKT2 335 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Cyp2g1Q9WV19 494 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Asb4Q9WV71 426 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Epb41l1Q9Z2H5 879 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Adh6bA0A1D5RMB0 384 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm13040A2A8C4 496 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm13101A2ASJ0 481 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Skint11A7XV14 364 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Gm13119B1ARV5 481 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Dlgap4B1AZP2 992 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Zfp563B8JJZ9 448 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Fam151bD3YUE4 279 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Nrp2O35375 931 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Matn4O89029 624 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Lsp1P19973 330 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Hsd17b4P51660 735 aaKnown RBP16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Kcna5Q61762 602 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Eif2s1Q6ZWX6 315 aaKnown RBP16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Zfp324Q78F42 583 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Olfr1085Q7TR64 313 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 AftphQ80WT5 931 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Q810N5 247 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Epb41l5Q8BGS1 731 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Tusc3Q8BTV1 347 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 MaelQ8BVN9 434 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Ankrd49Q8VE42 238 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Gpn2Q8VEJ1 310 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Pcdhb21Q91V48 774 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Basp1Q91XV3 226 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Tcam1Q99NB3 548 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Ergic3Q9CQE7 383 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Tmem53Q9D0Z3 276 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Slco6d1Q9D5W6 683 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Psma4Q9R1P0 261 aa16.1■□□□□ 0.17
Shh-201ENSMUST00000002708 Mterf1bB9EJ57 379 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Vmn2r90E9PXJ8 863 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Prpmp5E9PXN1 296 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Nccrp1G3X9C2 266 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Vmn2r8L7N472 848 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 CkbQ04447 381 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Foxk2Q3UCQ1 651 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 Syt14Q7TN84 555 aa16.09■□□□□ 0.17
Shh-201ENSMUST00000002708 HadhaQ8BMS1 763 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms