RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 MAPKAPK3Q16644 382 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 DGKKQ5KSL6 1271 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 GOLM1Q8NBJ4 401 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 RAET1EQ8TD07 263 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 OSCP1Q8WVF1 389 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 EGLN2Q96KS0 407 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 FAM126AQ9BYI3 521 aaPredicted RBP16.48■□□□□ 0.23
PHGDH-223ENST00000641597 ADNPQ9H2P0 1102 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 SRRDQ9UH36 339 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 MAGEL2Q9UJ55 1249 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 CPQQ9Y646 472 aa16.48■□□□□ 0.23
PHGDH-223ENST00000641597 AXIN1O15169 862 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 ULK1O75385 1050 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 ZNF821O75541 412 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 KCNH1O95259 989 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 TRBC1P01850 177 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 PGRP06401 933 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 JAK1P23458 1154 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 CD70P32970 193 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 CYP4F3Q08477 520 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 ELAVL2Q12926 359 aaKnown RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 SLC14A1Q13336 389 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 GPRC6AQ5T6X5 926 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 RBM23Q86U06 439 aaKnown RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 PROSER1Q86XN7 944 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 ZBTB2Q8N680 514 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 ZNF548Q8NEK5 533 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 FRS2Q8WU20 508 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 SKA2Q8WVK7 121 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 DTNBP1Q96EV8 351 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 TSSK3Q96PN8 268 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 CDK5RAP1Q96SZ6 601 aaKnown RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 CD244Q9BZW8 370 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 AMBRA1Q9C0C7 1298 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 FANCEQ9HB96 536 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 COMMD8Q9NX08 183 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 CD84Q9UIB8 345 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 GLYATL1P3A0A0U1RQE8 302 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 A0A1W2PQ67 120 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 PRRG1O14668 218 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 GSTA4O15217 222 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 UMPSP11172 480 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 MYCLP1P12525 358 aaPredicted RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 AGXTP21549 392 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 ACRV1P26436 265 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 CDKN2CP42773 168 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 BNIP3Q12983 259 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 C16orf72Q14CZ0 275 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 SF1Q15637 639 aaKnown RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 CDKN3Q16667 212 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 PDZD8Q8NEN9 1154 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 BPIFB6Q8NFQ5 453 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 C2orf15Q8WU43 125 aaKnown RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 SLC22A17Q8WUG5 538 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 TANKQ92844 425 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 PDLIM5Q96HC4 596 aaKnown RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 DPY30Q9C005 99 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 FBXO10Q9UK96 956 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 TDRKHQ9Y2W6 561 aaKnown RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 PCDHGA8Q9Y5G5 932 aa16.47■□□□□ 0.23
PHGDH-223ENST00000641597 TNPO3Q9Y5L0 923 aaKnown RBP16.47■□□□□ 0.23
PHGDH-223ENST00000641597 TYW5A2RUC4 315 aaKnown RBP16.46■□□□□ 0.23
PHGDH-223ENST00000641597 ARNTLO00327 626 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 RAP2AP10114 183 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 ZNF182P17025 639 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-223ENST00000641597 EFNA1P20827 205 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-223ENST00000641597 CD9P21926 228 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 SH3BGRP55822 239 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-223ENST00000641597 CHRNB3Q05901 458 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 DAG1Q14118 895 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 CRY1Q16526 586 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 MEP1AQ16819 746 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 SULT1C3Q6IMI6 304 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 SPESP1Q6UW49 350 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 VRK3Q8IV63 474 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 RBFAQ8N0V3 343 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 STK40Q8N2I9 435 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 SNRNP27Q8WVK2 155 aaKnown RBP16.46■□□□□ 0.23
PHGDH-223ENST00000641597 NCLNQ969V3 563 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 VOPP1Q96AW1 172 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 OR52E6Q96RD3 313 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 BARD1Q99728 777 aaKnown RBP16.46■□□□□ 0.23
PHGDH-223ENST00000641597 ACPTQ9BZG2 426 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 CD320Q9NPF0 282 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 OARD1Q9Y530 152 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 MAN1A2O60476 641 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 PRSS23O95084 383 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 GLUD1P00367 558 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 CST1P01037 141 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 BCKDHAP12694 445 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 B4GALNT1Q00973 533 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 BCL2L1Q07817 233 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 SMARCB1Q12824 385 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 INO80DQ53TQ3 878 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-223ENST00000641597 DUS1LQ6P1R4 473 aaKnown RBP16.46■□□□□ 0.23
PHGDH-223ENST00000641597 ZNF551Q7Z340 670 aaPredicted RBP16.46■□□□□ 0.23
PHGDH-223ENST00000641597 SNX20Q7Z614 316 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 RNF217Q8TC41 542 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 NETO1Q8TDF5 533 aa16.46■□□□□ 0.23
PHGDH-223ENST00000641597 IGSF21Q96ID5 467 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms