RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SMARCAD1Q9H4L7 1026 aa4.17□□□□□ -1.74
CCDC7-216ENST00000640058 HACL1Q9UJ83 578 aa4.17□□□□□ -1.74
CCDC7-216ENST00000640058 ZHX1Q9UKY1 873 aaPredicted RBP4.17□□□□□ -1.74
CCDC7-216ENST00000640058 EXO1Q9UQ84 846 aaKnown RBP4.17□□□□□ -1.74
CCDC7-216ENST00000640058 PTGES3LE9PB15 166 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 GAPDHSO14556 408 aaPredicted RBP4.16□□□□□ -1.74
CCDC7-216ENST00000640058 PRKRAO75569 313 aaKnown RBP4.16□□□□□ -1.74
CCDC7-216ENST00000640058 ZWINTO95229 277 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 KRT2P35908 639 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 IRF3Q14653 427 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 TEAD2Q15562 447 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 DOK6Q6PKX4 331 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 IL27RAQ6UWB1 636 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 METTL7BQ6UX53 244 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 MCEMP1Q8IX19 187 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 CFAP206Q8IYR0 622 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 MAPKAPK5-AS1Q8N8E1 139 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 HDAC2Q92769 488 aaKnown RBP4.16□□□□□ -1.74
CCDC7-216ENST00000640058 CLEC7AQ9BXN2 247 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 DPAGT1Q9H3H5 408 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 RPS10P5Q9NQ39 176 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 RNF186Q9NXI6 227 aa4.16□□□□□ -1.74
CCDC7-216ENST00000640058 LARSQ9P2J5 1176 aaKnown RBP4.16□□□□□ -1.74
CCDC7-216ENST00000640058 A0A1W2PN81 502 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 CDRT15L2A8MXV6 281 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 AP3D1O14617 1153 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 ZNF195O14628 629 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 GPIP06744 558 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 GABRA5P31644 462 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 CHRNA7P36544 502 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 PDX1P52945 283 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 DCAF7P61962 342 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 PRKCZQ05513 592 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 E2F5Q15329 346 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 SGSM1Q2NKQ1 1148 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 TCTE1Q5JU00 501 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 FAM180BQ6P0A1 224 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 PSRC1Q6PGN9 363 aaPredicted RBP4.15□□□□□ -1.75
CCDC7-216ENST00000640058 LINGO4Q6UY18 593 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 HAUS6Q7Z4H7 955 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 BMPERQ8N8U9 685 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 OR5M8Q8NGP6 311 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 OR13J1Q8NGT2 312 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 SAT2Q96F10 170 aaPredicted RBP4.15□□□□□ -1.75
CCDC7-216ENST00000640058 PKP2Q99959 881 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 FGFBP2Q9BYJ0 223 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 ARRDC1-AS1Q9H2J1 176 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 SDR39U1Q9NRG7 319 aaPredicted RBP4.15□□□□□ -1.75
CCDC7-216ENST00000640058 ZDHHC2Q9UIJ5 367 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 MTUS1Q9ULD2 1270 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 PLAGL1Q9UM63 463 aa4.15□□□□□ -1.75
CCDC7-216ENST00000640058 LNP1A1A4G5 178 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 XRCC3O43542 346 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 CREG1O75629 220 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 TPD52P55327 224 aaPredicted RBP4.14□□□□□ -1.75
CCDC7-216ENST00000640058 ARF3P61204 181 aaPredicted RBP4.14□□□□□ -1.75
CCDC7-216ENST00000640058 ARF1P84077 181 aaKnown RBP4.14□□□□□ -1.75
CCDC7-216ENST00000640058 GRAPQ13588 217 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 SNAI3Q3KNW1 292 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 PHLDA2Q53GA4 152 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 KLHL26Q53HC5 615 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 BSPRYQ5W0U4 402 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 TRIM65Q6PJ69 517 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 FIGLAQ6QHK4 219 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 TMCO3Q6UWJ1 677 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 LACC1Q8IV20 430 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 SPAG16Q8N0X2 631 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 FBXO39Q8N4B4 442 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 DCLK2Q8N568 766 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 TRIML1Q8N9V2 468 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 LRRC59Q96AG4 307 aaKnown RBP4.14□□□□□ -1.75
CCDC7-216ENST00000640058 MPP4Q96JB8 637 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 EPHA6Q9UF33 1036 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 WDR37Q9Y2I8 494 aa4.14□□□□□ -1.75
CCDC7-216ENST00000640058 ASTN2O75129 1339 aaPredicted RBP4.14□□□□□ -1.75
CCDC7-216ENST00000640058 HEPACAM2A8MVW5 462 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 KLF11O14901 512 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 PTP4A3O75365 173 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 VPREB1P12018 145 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 SQLEQ14534 574 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 ZNF239Q16600 458 aaKnown RBP4.13□□□□□ -1.75
CCDC7-216ENST00000640058 RSRC2Q7L4I2 434 aaKnown RBP4.13□□□□□ -1.75
CCDC7-216ENST00000640058 MAATS1Q7Z4T9 603 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 PTAR1Q7Z6K3 402 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-216ENST00000640058 LDB1Q86U70 411 aaPredicted RBP4.13□□□□□ -1.75
CCDC7-216ENST00000640058 COMMD2Q86X83 199 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 PPFIBP2Q8ND30 876 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 ZNRF4Q8WWF5 429 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 DYRK2Q92630 601 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 FUCA2Q9BTY2 467 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 NUP85Q9BW27 656 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 KCNK15Q9H427 330 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 TBC1D17Q9HA65 648 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 CACNG4Q9UBN1 327 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 TUBE1Q9UJT0 475 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 ANGPTL3Q9Y5C1 460 aa4.13□□□□□ -1.75
CCDC7-216ENST00000640058 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.12□□□□□ -1.75
CCDC7-216ENST00000640058 B4DLN1 442 aa4.12□□□□□ -1.75
CCDC7-216ENST00000640058 KHDRBS3O75525 346 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms