RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 PRR5-ARHGAP8B1AHC4 643 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 AGPSO00116 658 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 EREGO14944 169 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SMAD7O15105 426 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 GRID2O43424 1007 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 CACNG3O60359 315 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 MMP20O60882 483 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ECI2O75521 394 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SLC22A3O75751 556 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 POP7O75817 140 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 UQCRBP14927 111 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 IVDP26440 423 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 RRM2P31350 389 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ACTR1BP42025 376 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ACTR1AP61163 376 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 RPA4Q13156 261 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 COL19A1Q14993 1142 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ARL13AQ5H913 290 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 NEK5Q6P3R8 708 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ZNF549Q6P9A3 640 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 PAQR3Q6TCH7 311 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ENPP7Q6UWV6 458 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 PRR23BQ6ZRT6 265 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 LDB1Q86U70 411 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 DCP2Q8IU60 420 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 DEFB107AQ8IZN7 70 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 TEX26Q8N6G2 289 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 CNTD1Q8N815 330 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 OR9Q1Q8NGQ5 310 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 KLHDC7BQ96G42 594 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 C12orf66Q96MD2 445 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SLC38A3Q99624 504 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 MYOCQ99972 504 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 RNF38Q9H0F5 515 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SRMSQ9H3Y6 488 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SLC32A1Q9H598 525 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SEMA3GQ9NS98 782 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 CACNA2D2Q9NY47 1150 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 RUVBL1Q9Y265 456 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 PCDHGB3Q9Y5G1 929 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 HOXC11O43248 304 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 UGT1A9O60656 530 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SHOX2O60902 331 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 PEX11AO75192 247 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 PDE9AO76083 593 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 UNC5CO95185 931 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 CYP17A1P05093 508 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 GLULP15104 373 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 UGT1A6P19224 532 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 UGT1A1P22309 533 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 UGT1A4P22310 534 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 EEF1B2P24534 225 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 ACRV1P26436 265 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 UGT1A3P35503 534 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 UGT1A5P35504 534 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 BUD31P41223 144 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 ID4P47928 161 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 RPL38P63173 70 aaKnown RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 NIPAL4Q0D2K0 466 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 TMEM115Q12893 351 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 TRAF2Q12933 501 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 PPM1JQ5JR12 505 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 TRIM40Q6P9F5 258 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 GAREM2Q75VX8 874 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 DGLUCYQ7Z3D6 616 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 TMPRSS11BQ86T26 416 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SLC9B2Q86UD5 537 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 TMEM173Q86WV6 379 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 DHFR2Q86XF0 187 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 APCDD1Q8J025 514 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 CLEC4FQ8N1N0 589 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 TTC29Q8NA56 475 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 BTN2A2Q8WVV5 523 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ELSPBP1Q96BH3 223 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 WDR92Q96MX6 357 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SPOCK3Q9BQ16 436 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ABCG4Q9H172 646 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 DPEP2Q9H4A9 486 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 EPHX3Q9H6B9 360 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 UGT1A7Q9HAW7 530 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 UGT1A10Q9HAW8 530 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 UGT1A8Q9HAW9 530 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 TRIM39Q9HCM9 518 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 NDOR1Q9UHB4 597 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SLCO3A1Q9UIG8 710 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ZNF490Q9ULM2 529 aaPredicted RBP5.42□□□□□ -1.54
CHD2-227ENST00000637572 VPS4AQ9UN37 437 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SNX7Q9UNH6 387 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 TMED5Q9Y3A6 229 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 LOC285095A0A1B0GVY8 99 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 RASSF9O75901 435 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 IGLV3-25P01717 112 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 PROCP04070 461 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 HNRNPLP14866 589 aaKnown RBP eCLIP5.42□□□□□ -1.543e-7■■■■□ 19.8
CHD2-227ENST00000637572 SLC6A4P31645 630 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SSR2P43308 183 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 CPA2P48052 419 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 SPINT3P49223 89 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 CHIT1Q13231 466 aa5.42□□□□□ -1.54
CHD2-227ENST00000637572 ELOCQ15369 112 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms