RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 TREX1Q9NSU2 369 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 SYBUQ9NX95 663 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 SAMD15Q9P1V8 674 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 POLG2Q9UHN1 485 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 RPS6KL1Q9Y6S9 549 aa13.41□□□□□ -0.26
PNKP-228ENST00000637325 SLC9B1P1A6NJY1 282 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 C2orf74A8MZ97 194 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 BTN3A3O00478 584 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 PRMT5O14744 637 aaPredicted RBP13.4□□□□□ -0.26
PNKP-228ENST00000637325 PFDN6O15212 129 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 VAPBO95292 243 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 APOA4P06727 396 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 ACADLP28330 430 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 PRDX3P30048 256 aaKnown RBP13.4□□□□□ -0.26
PNKP-228ENST00000637325 CCR7P32248 378 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 SHMT2P34897 504 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 DLSTP36957 453 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 STAT5AP42229 794 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 TUBB4BP68371 445 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 MC1RQ01726 317 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 HSPA14Q0VDF9 509 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 TUBB2AQ13885 445 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 KCNJ11Q14654 390 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 TMED2Q15363 201 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 MRNIPQ6NTE8 343 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 CES3Q6UWW8 571 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 MPP5Q8N3R9 675 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 GSDMBQ8TAX9 411 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 ACTRT1Q8TDG2 376 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 COG1Q8WTW3 980 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 ASZ1Q8WWH4 475 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 MFSD3Q96ES6 412 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 MED8Q96G25 268 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 SLC45A3Q96JT2 553 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 PPM1MQ96MI6 270 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 FCRL4Q96PJ5 515 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 PANX3Q96QZ0 392 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 TUBB2BQ9BVA1 445 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 KIFC1Q9BW19 673 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 KCNF1Q9H3M0 494 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 MARCH4Q9P2E8 410 aaPredicted RBP13.4□□□□□ -0.26
PNKP-228ENST00000637325 GNPTGQ9UJJ9 305 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 POMT2Q9UKY4 750 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 PADI1Q9ULC6 663 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 SOX13Q9UN79 622 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 SPTA1P02549 2419 aa13.4□□□□□ -0.26
PNKP-228ENST00000637325 KALRNO60229 2985 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 IQCF5A8MTL0 148 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 BHMG1C9JSJ3 638 aaPredicted RBP13.39□□□□□ -0.27
PNKP-228ENST00000637325 NKX2-8O15522 239 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 PHF2O75151 1096 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 AVILO75366 819 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 PAMP19021 973 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 GPR19Q15760 415 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 TBR1Q16650 682 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 CYP1B1Q16678 543 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 LINC00303Q3SY05 128 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 DNAJC21Q5F1R6 531 aaKnown RBP13.39□□□□□ -0.27
PNKP-228ENST00000637325 PWWP2BQ6NUJ5 590 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 LRRC6Q86X45 466 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 TMEM126BQ8IUX1 230 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 KRT222Q8N1A0 295 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 ZNF843Q8N446 348 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 OR8K5Q8NH50 307 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 OR5K2Q8NHB8 316 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 CFAP61Q8NHU2 1237 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 KCND1Q9NSA2 647 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 ACTR10Q9NZ32 417 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 IL17BQ9UHF5 180 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 CROTQ9UKG9 612 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 SNX12Q9UMY4 172 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 ICKQ9UPZ9 632 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 BTRCQ9Y297 605 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 BAHCC1Q9P281 2608 aa13.39□□□□□ -0.27
PNKP-228ENST00000637325 PIPSLA2A3N6 862 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 SDR42E2A6NKP2 422 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 GOLGA8KD6RF30 607 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 GOLGA8TH3BQL2 631 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 GOLGA8MH3BSY2 632 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 CES2O00748 559 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 KPNA5O15131 536 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 KATNA1O75449 491 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 SCRG1O75711 98 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 C1QL1O75973 258 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 TIAF1O95411 115 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 NTRK1P04629 796 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 RPN2P04844 631 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 PRKAR1AP10644 381 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 TCN2P20062 427 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 MAGEA6P43360 314 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 FNTAP49354 379 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 EIF3BP55884 814 aaKnown RBP13.38□□□□□ -0.27
PNKP-228ENST00000637325 ABRQ12979 859 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 PPP1R7Q15435 360 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 RNF187Q5TA31 235 aaPredicted RBP13.38□□□□□ -0.27
PNKP-228ENST00000637325 ANKRD22Q5VYY1 191 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 ARMC3Q5W041 872 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 C16orf46Q6P387 395 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 BORAQ6PGQ7 559 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 UNC5AQ6ZN44 842 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms