RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 CLIP3Q96DZ5 547 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 RAB6BQ9NRW1 208 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 PAK5Q9P286 719 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 POLG2Q9UHN1 485 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 ANAPC5Q9UJX4 755 aa17.4■□□□□ 0.38
PNKP-225ENST00000636214 BSNQ9UPA5 3926 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 CCDC162PA2VCL2 907 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 OR51F1A6NGY5 319 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 ARHGAP6O43182 974 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 NRDCO43847 1150 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 APRTP07741 180 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 ADRA1DP25100 572 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 PRDX3P30048 256 aaKnown RBP17.39■□□□□ 0.37
PNKP-225ENST00000636214 FOXN2P32314 431 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 SHMT2P34897 504 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 FASTKD1Q53R41 847 aaKnown RBP17.39■□□□□ 0.37
PNKP-225ENST00000636214 AARS2Q5JTZ9 985 aaKnown RBP17.39■□□□□ 0.37
PNKP-225ENST00000636214 TSTD2Q5T7W7 516 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 FAM199XQ6PEV8 388 aaPredicted RBP17.39■□□□□ 0.37
PNKP-225ENST00000636214 SYVN1Q86TM6 617 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 TBC1D21Q8IYX1 336 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 HDAC10Q969S8 669 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 PPM1MQ96MI6 270 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 XKR8Q9H6D3 395 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 ACTR10Q9NZ32 417 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 SERTAD3Q9UJW9 196 aa17.39■□□□□ 0.37
PNKP-225ENST00000636214 TDRKHQ9Y2W6 561 aaKnown RBP17.39■□□□□ 0.37
PNKP-225ENST00000636214 BTN3A3O00478 584 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 SUN1O94901 812 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 GOT2P00505 430 aaKnown RBP17.38■□□□□ 0.37
PNKP-225ENST00000636214 HBQ1P09105 142 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 PMS2P54278 862 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 GSTA5Q7RTV2 222 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 GPR135Q8IZ08 494 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 OR5AR1Q8NGP9 310 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 OR4L1Q8NH43 312 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 MAIP1Q8WWC4 291 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 THAP4Q8WY91 577 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 RANBP9Q96S59 729 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 ACTR5Q9H9F9 607 aaPredicted RBP17.38■□□□□ 0.37
PNKP-225ENST00000636214 RIMKLBQ9ULI2 386 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 FARSAQ9Y285 508 aaKnown RBP17.38■□□□□ 0.37
PNKP-225ENST00000636214 TP53TG5Q9Y2B4 290 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 PRSS21Q9Y6M0 314 aa17.38■□□□□ 0.37
PNKP-225ENST00000636214 RP1L1Q8IWN7 2480 aaPredicted RBP17.38■□□□□ 0.37
PNKP-225ENST00000636214 E7EQ34 232 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 ST6GAL1P15907 406 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 CASRP41180 1078 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 ITGA1P56199 1179 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 KLRB1Q12918 225 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 GPS2Q13227 327 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 SEMA5AQ13591 1074 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 ZNF658BQ4V348 819 aaPredicted RBP17.37■□□□□ 0.37
PNKP-225ENST00000636214 SPESP1Q6UW49 350 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 C4orf22Q6V702 233 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 OR13J1Q8NGT2 312 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 GSDMBQ8TAX9 411 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 LRFN5Q96NI6 719 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 PITPNM3Q9BZ71 974 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 SNX7Q9UNH6 387 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 TCAF1Q9Y4C2 921 aa17.37■□□□□ 0.37
PNKP-225ENST00000636214 C9J4A7 227 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 AP3B1O00203 1094 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 MEN1O00255 615 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 RPN2P04844 631 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 FURINP09958 794 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 CCDC175P0C221 793 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 PSMA3P25788 255 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 CSE1LP55060 971 aaKnown RBP17.36■□□□□ 0.37
PNKP-225ENST00000636214 RPS18P62269 152 aaKnown RBP17.36■□□□□ 0.37
PNKP-225ENST00000636214 BASP1P80723 227 aaKnown RBP17.36■□□□□ 0.37
PNKP-225ENST00000636214 TMED2Q15363 201 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 UGT8Q16880 541 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 MEI1Q5TIA1 1274 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 TCTN3Q6NUS6 607 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 MICALCLQ6ZW33 695 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 TMEM135Q86UB9 458 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 ADGRF3Q8IZF5 1079 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 DSELQ8IZU8 1212 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 OTUD6BQ8N6M0 293 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 C19orf47Q8N9M1 422 aaKnown RBP17.36■□□□□ 0.37
PNKP-225ENST00000636214 TEX19Q8NA77 164 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 OR5K2Q8NHB8 316 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 PEX13Q92968 403 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 TRAPPC9Q96Q05 1148 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 KLHL25Q9H0H3 589 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 EPN3Q9H201 632 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 CHST8Q9H2A9 424 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 LZTFL1Q9NQ48 299 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 CASS4Q9NQ75 786 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 ACSS2Q9NR19 701 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 IRAK4Q9NWZ3 460 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 OR6C2Q9NZP2 312 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 SLC2A6Q9UGQ3 507 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 G3BP2Q9UN86 482 aaKnown RBP17.36■□□□□ 0.37
PNKP-225ENST00000636214 ICKQ9UPZ9 632 aa17.36■□□□□ 0.37
PNKP-225ENST00000636214 OR1I1O60431 355 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 APOA4P06727 396 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 MSL3P1P0C860 447 aa17.35■□□□□ 0.37
PNKP-225ENST00000636214 ETS1P14921 441 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms