RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ATXN3P54252 364 aaPredicted RBP14.13□□□□□ -0.15
LINC00339-208ENST00000634934 IL2P60568 153 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 PLOD1Q02809 727 aaPredicted RBP14.13□□□□□ -0.15
LINC00339-208ENST00000634934 DMPKQ09013 629 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 CSRP2Q16527 193 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 ZNF423Q2M1K9 1284 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 METRNLQ641Q3 311 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 TBC1D1Q86TI0 1168 aaPredicted RBP14.13□□□□□ -0.15
LINC00339-208ENST00000634934 NRROSQ86YC3 692 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 VRK3Q8IV63 474 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 FSTL5Q8N475 847 aaPredicted RBP14.13□□□□□ -0.15
LINC00339-208ENST00000634934 SPATA6LQ8N4H0 392 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 FITM2Q8N6M3 262 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 ZNF548Q8NEK5 533 aaPredicted RBP14.13□□□□□ -0.15
LINC00339-208ENST00000634934 OR2I1PQ8NGU4 316 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 ISL2Q96A47 359 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 LINGO1Q96FE5 620 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 TUBB6Q9BUF5 446 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 IL21RQ9HBE5 538 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 PRDM8Q9NQV8 689 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 SAR1AQ9NR31 198 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 PCMTD2Q9NV79 361 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 ACSL5Q9ULC5 683 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 CACNA1EQ15878 2313 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 PCDH15Q96QU1 1955 aa14.13□□□□□ -0.15
LINC00339-208ENST00000634934 A0A087X1B8 175 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 A0A1B0GTQ1 180 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 GDF9O60383 454 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 DFNA5O60443 496 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 CER1O95813 267 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 SLC35G4P0C7Q5 338 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 ZNF806P0C7X5 589 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 CCDC166P0CW27 439 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 PYGBP11216 843 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 HOXD11P31277 338 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-208ENST00000634934 MAGEA12P43365 314 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 RXRGP48443 463 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 RASSF2P50749 326 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 CLCNKAP51800 687 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 IRF9Q00978 393 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 BNIP3Q12983 259 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 RPA4Q13156 261 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 SETDB1Q15047 1291 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 SHBQ15464 509 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 CMPK2Q5EBM0 449 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 TLDC1Q6P9B6 456 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 XKR5Q6UX68 686 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 PRR23CQ6ZRP0 262 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 GKN2Q86XP6 184 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 C4orf33Q8N1A6 199 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 NKAPQ8N5F7 415 aaKnown RBP14.12□□□□□ -0.15
LINC00339-208ENST00000634934 ANKRD49Q8WVL7 239 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 GLMNQ92990 594 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 KLHL29Q96CT2 875 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 UNKQ9C0B0 810 aaKnown RBP14.12□□□□□ -0.15
LINC00339-208ENST00000634934 WWP1Q9H0M0 922 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 UCKL1Q9NWZ5 548 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 TAAR2Q9P1P5 351 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 TBC1D29Q9UFV1 150 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 CDYLQ9Y232 598 aa14.12□□□□□ -0.15
LINC00339-208ENST00000634934 LNP1A1A4G5 178 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 SLCO2B1O94956 709 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 TGDSO95455 350 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 CBSLP0DN79 551 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 ENO3P13929 434 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-208ENST00000634934 KRT4P19013 534 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 EPHA8P29322 1005 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-208ENST00000634934 CBSP35520 551 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 ABRQ12979 859 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 CSHL1Q14406 222 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 FAM91A1Q658Y4 838 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 PIWIL4Q7Z3Z4 852 aaKnown RBP14.11□□□□□ -0.15
LINC00339-208ENST00000634934 SLC22A15Q8IZD6 547 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 MYO1HQ8N1T3 1032 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 ANKRD42Q8N9B4 389 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 FAM46DQ8NEK8 389 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-208ENST00000634934 ACMSDQ8TDX5 336 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 KCTD4Q8WVF5 259 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 TSNARE1Q96NA8 513 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 OR52A5Q9H2C5 316 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 DPEP2Q9H4A9 486 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 RUVBL2Q9Y230 463 aaKnown RBP14.11□□□□□ -0.15
LINC00339-208ENST00000634934 WDR37Q9Y2I8 494 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 TMEM131Q92545 1883 aa14.11□□□□□ -0.15
LINC00339-208ENST00000634934 PRR19A6NJB7 356 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 IFRD1O00458 451 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 YY2O15391 372 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 YKT6O15498 198 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 FFAR2O15552 330 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 LRP3O75074 770 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 WISP3O95389 354 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-208ENST00000634934 EML2O95834 649 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 TSPAN12O95859 305 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 ANXA6P08133 673 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 CSRP3P50461 194 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 CCT8P50990 548 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 GBX1Q14549 363 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 DEFB133Q30KQ1 61 aa14.1□□□□□ -0.15
LINC00339-208ENST00000634934 GATAD2AQ86YP4 633 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms