RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ASXL3Q9C0F0 2248 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 POC1B-GALNT4F8VUJ3 575 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 NUDT21O43809 227 aaKnown RBP14.35□□□□□ -0.11
PNKP-221ENST00000627317 FAM155BO75949 473 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 SLCO2B1O94956 709 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 XRCC1P18887 633 aaPredicted RBP14.35□□□□□ -0.11
PNKP-221ENST00000627317 FDXRP22570 491 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 ATP5DP30049 168 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 SLC19A1P41440 591 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 SKIV2L2P42285 1042 aaKnown RBP14.35□□□□□ -0.11
PNKP-221ENST00000627317 SLC29A2Q14542 456 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 CAPRIN2Q6IMN6 1127 aaKnown RBP14.35□□□□□ -0.11
PNKP-221ENST00000627317 DUS1LQ6P1R4 473 aaKnown RBP14.35□□□□□ -0.11
PNKP-221ENST00000627317 ZNF438Q7Z4V0 828 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 VRK3Q8IV63 474 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 CD200R1Q8TD46 325 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 TFGQ92734 400 aaPredicted RBP14.35□□□□□ -0.11
PNKP-221ENST00000627317 CAVIN3Q969G5 261 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 SH3KBP1Q96B97 665 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 TSPAN17Q96FV3 270 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 INSM2Q96T92 566 aaPredicted RBP14.35□□□□□ -0.11
PNKP-221ENST00000627317 PAFAH2Q99487 392 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 GPR22Q99680 433 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 SLC30A3Q99726 388 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 OLFM1Q99784 485 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 MCMBPQ9BTE3 642 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 LATS2Q9NRM7 1088 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 ZNF624Q9P2J8 865 aaPredicted RBP14.35□□□□□ -0.11
PNKP-221ENST00000627317 SLC39A10Q9ULF5 831 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 CDYLQ9Y232 598 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 VWA7Q9Y334 891 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 KNTC1P50748 2209 aa14.35□□□□□ -0.11
PNKP-221ENST00000627317 A0A087WV48 116 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 A0A1W2PQM1 296 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 ZW10O43264 779 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 TLX3O43711 291 aaPredicted RBP14.34□□□□□ -0.11
PNKP-221ENST00000627317 BRINP1O60477 761 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 DXOO77932 396 aaKnown RBP14.34□□□□□ -0.11
PNKP-221ENST00000627317 RPN2P04844 631 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 ENO3P13929 434 aaPredicted RBP14.34□□□□□ -0.11
PNKP-221ENST00000627317 CD9P21926 228 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 NDUFS1P28331 727 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 MSH2P43246 934 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 PPM1FP49593 454 aaPredicted RBP14.34□□□□□ -0.11
PNKP-221ENST00000627317 RGS4P49798 205 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 POU4F1Q01851 419 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 GBX1Q14549 363 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 USP10Q14694 798 aaKnown RBP14.34□□□□□ -0.11
PNKP-221ENST00000627317 NR1D2Q14995 579 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 ACSBG2Q5FVE4 666 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.34□□□□□ -0.11
PNKP-221ENST00000627317 RBM44Q6ZP01 1051 aaKnown RBP14.34□□□□□ -0.11
PNKP-221ENST00000627317 RBM12BQ8IXT5 1001 aaKnown RBP14.34□□□□□ -0.11
PNKP-221ENST00000627317 CPNE9Q8IYJ1 553 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 CFAP61Q8NHU2 1237 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 WDR48Q8TAF3 677 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 SLC44A1Q8WWI5 657 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 FOPNLQ96NB1 174 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 FERD3LQ96RJ6 166 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 SLC38A3Q99624 504 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 CCDC77Q9BR77 488 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 HGH1Q9BTY7 390 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.34□□□□□ -0.11
PNKP-221ENST00000627317 ABCG4Q9H172 646 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 EPB41L4BQ9H329 900 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 ASF1AQ9Y294 204 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 MTO1Q9Y2Z2 717 aaKnown RBP14.34□□□□□ -0.11
PNKP-221ENST00000627317 ENTPD2Q9Y5L3 495 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 COLEC10Q9Y6Z7 277 aa14.34□□□□□ -0.11
PNKP-221ENST00000627317 IGSF10Q6WRI0 2623 aa14.33□□□□□ -0.11
PNKP-221ENST00000627317 PMS2P1A4D2B8 440 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 D6RAR5 112 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 EIF3FO00303 357 aaPredicted RBP14.33□□□□□ -0.12
PNKP-221ENST00000627317 PPM1DO15297 605 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 ERLIN1O75477 346 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 ITGA2BP08514 1039 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 CBSLP0DN79 551 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 PNLIPP16233 465 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 ACADLP28330 430 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 CBSP35520 551 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 HSD17B3P37058 310 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 SERPINB9P50453 376 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 TAS2R39P59534 338 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 TIAL1Q01085 375 aaKnown RBP eCLIP14.33□□□□□ -0.12
PNKP-221ENST00000627317 ABRQ12979 859 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 PLCL1Q15111 1095 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 LRRC8EQ6NSJ5 796 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 PAQR3Q6TCH7 311 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 IGF2-ASQ6U949 168 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 UNC5DQ6UXZ4 953 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 SPRED1Q7Z699 444 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 ZNF761Q86XN6 746 aaPredicted RBP14.33□□□□□ -0.12
PNKP-221ENST00000627317 Q8N9G6 341 aaPredicted RBP14.33□□□□□ -0.12
PNKP-221ENST00000627317 ACVR1CQ8NER5 493 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 SNIP1Q8TAD8 396 aaKnown RBP14.33□□□□□ -0.12
PNKP-221ENST00000627317 GRAMD1AQ96CP6 724 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 PRR11Q96HE9 360 aaPredicted RBP14.33□□□□□ -0.12
PNKP-221ENST00000627317 ZMYND15Q9H091 742 aa14.33□□□□□ -0.12
PNKP-221ENST00000627317 TRIT1Q9H3H1 467 aaKnown RBP14.33□□□□□ -0.12
PNKP-221ENST00000627317 MVB12BQ9H7P6 319 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms