RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 TMEM114B3SHH9 223 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 TARM1B6A8C7 271 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 FLRT2O43155 660 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 GRID2O43424 1007 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 TRIM13O60858 407 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 CBFA2T3O75081 653 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 LYPLA1O75608 230 aaPredicted RBP18.74■□□□□ 0.59
CNOT9-209ENST00000627282 DGKAP23743 735 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 SKIV2L2P42285 1042 aaKnown RBP18.74■□□□□ 0.59
CNOT9-209ENST00000627282 TTPAP49638 278 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 KPNA2P52292 529 aaKnown RBP18.74■□□□□ 0.59
CNOT9-209ENST00000627282 C1orf61Q13536 156 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 SUZ12Q15022 739 aaKnown RBP18.74■□□□□ 0.59
CNOT9-209ENST00000627282 PRRT3Q5FWE3 981 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 FAM45BPQ6NSW5 357 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 C11orf96Q7Z7L8 435 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 TBC1D1Q86TI0 1168 aaPredicted RBP18.74■□□□□ 0.59
CNOT9-209ENST00000627282 GALNT13Q8IUC8 556 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 FSTL5Q8N475 847 aaPredicted RBP18.74■□□□□ 0.59
CNOT9-209ENST00000627282 ZNF548Q8NEK5 533 aaPredicted RBP18.74■□□□□ 0.59
CNOT9-209ENST00000627282 CCL4L1Q8NHW4 92 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 FAM45AQ8TCE6 357 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 SAP25Q8TEE9 199 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 SETD7Q8WTS6 366 aaKnown RBP18.74■□□□□ 0.59
CNOT9-209ENST00000627282 HEXDCQ8WVB3 486 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 CLPBQ9H078 707 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 INTS10Q9NVR2 710 aaKnown RBP18.74■□□□□ 0.59
CNOT9-209ENST00000627282 HEY2Q9UBP5 337 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 ZNHIT2Q9UHR6 403 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 PCOLCE2Q9UKZ9 415 aa18.74■□□□□ 0.59
CNOT9-209ENST00000627282 SPAARA0A1B0GVQ0 90 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 CFAP99D6REC4 459 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 H3BM21 787 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 HGSO14964 777 aaPredicted RBP18.73■□□□□ 0.59
CNOT9-209ENST00000627282 ATP5HO75947 161 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 WISP3O95389 354 aaPredicted RBP18.73■□□□□ 0.59
CNOT9-209ENST00000627282 ATP1B2P14415 290 aaPredicted RBP18.73■□□□□ 0.59
CNOT9-209ENST00000627282 PMLP29590 882 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 NSG1P42857 185 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 NCALDP61601 193 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 SIM1P81133 766 aaPredicted RBP18.73■□□□□ 0.59
CNOT9-209ENST00000627282 GTF2H3Q13889 308 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 TMEM220Q6QAJ8 160 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 MTDHQ86UE4 582 aaKnown RBP18.73■□□□□ 0.59
CNOT9-209ENST00000627282 LRRTM4Q86VH4 590 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 GATAD2AQ86YP4 633 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 TRAPPC5Q8IUR0 188 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 SLC25A45Q8N413 288 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 PPP4R1Q8TF05 950 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 SORT1Q99523 831 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 TTC1Q99614 292 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 IGSF5Q9NSI5 407 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 TRNAU1APQ9NX07 287 aaKnown RBP18.73■□□□□ 0.59
CNOT9-209ENST00000627282 SLC23A2Q9UGH3 650 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 DNAJC16Q9Y2G8 782 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 GPSM3Q9Y4H4 160 aa18.73■□□□□ 0.59
CNOT9-209ENST00000627282 ARHGEF17Q96PE2 2063 aaPredicted RBP18.73■□□□□ 0.59
CNOT9-209ENST00000627282 YKT6O15498 198 aa18.72■□□□□ 0.59
CNOT9-209ENST00000627282 LIPMQ5VYY2 423 aa18.72■□□□□ 0.59
CNOT9-209ENST00000627282 WDR75Q8IWA0 830 aaKnown RBP18.72■□□□□ 0.59
CNOT9-209ENST00000627282 BEND7Q8N7W2 519 aaPredicted RBP18.72■□□□□ 0.59
CNOT9-209ENST00000627282 PIWIL2Q8TC59 973 aaKnown RBP18.72■□□□□ 0.59
CNOT9-209ENST00000627282 LMX1AQ8TE12 382 aa18.72■□□□□ 0.59
CNOT9-209ENST00000627282 LPGAT1Q92604 370 aa18.72■□□□□ 0.59
CNOT9-209ENST00000627282 TCF12Q99081 682 aa18.72■□□□□ 0.59
CNOT9-209ENST00000627282 MRPL57Q9BQC6 102 aaKnown RBP18.72■□□□□ 0.59
CNOT9-209ENST00000627282 MRPL46Q9H2W6 279 aaKnown RBP18.72■□□□□ 0.59
CNOT9-209ENST00000627282 CPSF2Q9P2I0 782 aaKnown RBP18.72■□□□□ 0.59
CNOT9-209ENST00000627282 SPASTQ9UBP0 616 aa18.72■□□□□ 0.59
CNOT9-209ENST00000627282 ZFP69BQ9UJL9 534 aa18.72■□□□□ 0.59
CNOT9-209ENST00000627282 ACACBO00763 2458 aa18.72■□□□□ 0.59
CNOT9-209ENST00000627282 TK2O00142 265 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 AQP9O43315 295 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 NDUFS3O75489 264 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 KITP10721 976 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 ACP5P13686 325 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 CTSEP14091 401 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 ARRB2P32121 409 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 PPARGP37231 505 aaPredicted RBP18.71■□□□□ 0.59
CNOT9-209ENST00000627282 SLC26A3P40879 764 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 GLRBP48167 497 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 PRLHRP49683 370 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 CTBSQ01459 385 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 TRIP6Q15654 476 aaKnown RBP18.71■□□□□ 0.59
CNOT9-209ENST00000627282 FAM83EQ2M2I3 478 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 PLA2G4EQ3MJ16 856 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 BCL7AQ4VC05 210 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 AGAP9Q5VTM2 703 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 ZNF549Q6P9A3 640 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 ATG14Q6ZNE5 492 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 CHST15Q7LFX5 561 aaPredicted RBP18.71■□□□□ 0.59
CNOT9-209ENST00000627282 NRROSQ86YC3 692 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 BAHD1Q8TBE0 780 aaPredicted RBP18.71■□□□□ 0.59
CNOT9-209ENST00000627282 GPBAR1Q8TDU6 330 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 GATA5Q9BWX5 397 aaPredicted RBP18.71■□□□□ 0.59
CNOT9-209ENST00000627282 P2RY12Q9H244 342 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 TXLNGQ9NUQ3 528 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 GPR34Q9UPC5 381 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 BTBD3Q9Y2F9 522 aa18.71■□□□□ 0.59
CNOT9-209ENST00000627282 TPRP12270 2363 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms