RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 DUS1LQ6P1R4 473 aaKnown RBP12.09□□□□□ -0.47
LINC00963-217ENST00000624009 UNC5DQ6UXZ4 953 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 FAM92BQ6ZTR7 304 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 SYDE1Q6ZW31 735 aaPredicted RBP12.09□□□□□ -0.47
LINC00963-217ENST00000624009 PCGF5Q86SE9 256 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 AMIGO1Q86WK6 493 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 PPIL6Q8IXY8 311 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 CACNA2D3Q8IZS8 1091 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 IL22RA1Q8N6P7 574 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 NAT8LQ8N9F0 302 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 SIDT2Q8NBJ9 832 aaKnown RBP12.09□□□□□ -0.47
LINC00963-217ENST00000624009 OR52E1Q8NGJ3 308 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 NAT14Q8WUY8 206 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 TTC9Q92623 222 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 KIAA1143Q96AT1 154 aaPredicted RBP12.09□□□□□ -0.47
LINC00963-217ENST00000624009 MFSD3Q96ES6 412 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 SLC45A3Q96JT2 553 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 SERPINB12Q96P63 405 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 OR6C1Q96RD1 312 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 FERD3LQ96RJ6 166 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 MAP3K3Q99759 626 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 TUBB2BQ9BVA1 445 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 SYBUQ9NX95 663 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 TRMT1Q9NXH9 659 aaKnown RBP12.09□□□□□ -0.47
LINC00963-217ENST00000624009 FAM8A1Q9UBU6 413 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 RARRES3Q9UL19 164 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 ASF1AQ9Y294 204 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 PCDHGA4Q9Y5G9 962 aa12.09□□□□□ -0.47
LINC00963-217ENST00000624009 TCRBV7S3A2A0A539 114 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 C2orf74A8MZ97 194 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 NDUFS3O75489 264 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 USP1O94782 785 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 TMEM63AO94886 807 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 VAPBO95292 243 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 ESR1P03372 595 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 CCR7P32248 378 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 SEPHS1P49903 392 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 KPNA2P52292 529 aaKnown RBP12.08□□□□□ -0.48
LINC00963-217ENST00000624009 CRADDP78560 199 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 FOXM1Q08050 763 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 SEMA3AQ14563 771 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 TRIP13Q15645 432 aaPredicted RBP12.08□□□□□ -0.48
LINC00963-217ENST00000624009 PLEKHS1Q5SXH7 462 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 OR4E2Q8NGC2 313 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 LPGAT1Q92604 370 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 NAT9Q9BTE0 207 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 ULBP3Q9BZM4 244 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 APMAPQ9HDC9 416 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 INTS10Q9NVR2 710 aaKnown RBP12.08□□□□□ -0.48
LINC00963-217ENST00000624009 CDYLQ9Y232 598 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 SAR1BQ9Y6B6 198 aa12.08□□□□□ -0.48
LINC00963-217ENST00000624009 MDC1Q14676 2089 aaKnown RBP12.07□□□□□ -0.48
LINC00963-217ENST00000624009 CCDC188H7C350 402 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 MAP3K7O43318 606 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 FKBP9O95302 570 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 PRDX3P30048 256 aaKnown RBP12.07□□□□□ -0.48
LINC00963-217ENST00000624009 STAT5AP42229 794 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 ARL4DP49703 201 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 VPS41P49754 854 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 PPP1CAP62136 330 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 SH3BP2P78314 561 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 MC1RQ01726 317 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 TUBB3Q13509 450 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 PTK6Q13882 451 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 PPP1R7Q15435 360 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 ANKRD20A4Q4UJ75 823 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 RNASEH2BQ5TBB1 312 aaKnown RBP12.07□□□□□ -0.48
LINC00963-217ENST00000624009 ANKRD22Q5VYY1 191 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 C6orf15Q6UXA7 325 aaPredicted RBP12.07□□□□□ -0.48
LINC00963-217ENST00000624009 CREG2Q8IUH2 290 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 CILP2Q8IUL8 1156 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 DCUN1D3Q8IWE4 304 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 ADGRF3Q8IZF5 1079 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 PHC3Q8NDX5 983 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 GABPB2Q8TAK5 448 aaPredicted RBP12.07□□□□□ -0.48
LINC00963-217ENST00000624009 CALML6Q8TD86 181 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 SLC39A7Q92504 469 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 LRFN5Q96NI6 719 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 BIRC8Q96P09 236 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 CATSPER2Q96P56 530 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 BBC3Q96PG8 261 aaPredicted RBP12.07□□□□□ -0.48
LINC00963-217ENST00000624009 NAPGQ99747 312 aaPredicted RBP12.07□□□□□ -0.48
LINC00963-217ENST00000624009 CTRCQ99895 268 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 RAB11FIP5Q9BXF6 653 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 FGF21Q9NSA1 209 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 MARCH4Q9P2E8 410 aaPredicted RBP12.07□□□□□ -0.48
LINC00963-217ENST00000624009 KLHL42Q9P2K6 505 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 MED13Q9UHV7 2174 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 BSNQ9UPA5 3926 aa12.07□□□□□ -0.48
LINC00963-217ENST00000624009 ZCWPW2A0A1B0GU75 182 aa12.06□□□□□ -0.48
LINC00963-217ENST00000624009 PIPSLA2A3N6 862 aa12.06□□□□□ -0.48
LINC00963-217ENST00000624009 CTAGE9A4FU28 777 aa12.06□□□□□ -0.48
LINC00963-217ENST00000624009 USP27XA6NNY8 438 aa12.06□□□□□ -0.48
LINC00963-217ENST00000624009 ZNF891A8MT65 544 aaPredicted RBP12.06□□□□□ -0.48
LINC00963-217ENST00000624009 C21orf140B9A014 251 aa12.06□□□□□ -0.48
LINC00963-217ENST00000624009 AGRPO00253 132 aa12.06□□□□□ -0.48
LINC00963-217ENST00000624009 BTN3A3O00478 584 aa12.06□□□□□ -0.48
LINC00963-217ENST00000624009 BTN3A1O00481 513 aa12.06□□□□□ -0.48
LINC00963-217ENST00000624009 NDC80O14777 642 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms