RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CARTPTQ16568 116 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 LRRC66Q68CR7 880 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 OR2L2Q8NH16 312 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 KLQ9UEF7 1012 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 USP21Q9UK80 565 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 CEMIPQ8WUJ3 1361 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 TPRP12270 2363 aaKnown RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 PREX1Q8TCU6 1659 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 KRBA1A5PL33 1030 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 XPNPEP2O43895 674 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 UBBP0CG47 229 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 UBCP0CG48 685 aaKnown RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 RAB3AP20336 220 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 ENDOUP21128 410 aaKnown RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 NRIP1P48552 1158 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 SLC12A3P55017 1021 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 RPS27AP62979 156 aaKnown RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 UBA52P62987 128 aaKnown RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 MRPS10P82664 201 aaKnown RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 NOMO2Q5JPE7 1267 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 TNS4Q8IZW8 715 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 GALNT11Q8NCW6 608 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 OR2L5Q8NG80 312 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 TSEN15Q8WW01 171 aaKnown RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 ANKRD60Q9BZ19 345 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 GPN2Q9H9Y4 310 aaPredicted RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 PRMT8Q9NR22 394 aaPredicted RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 ZMAT5Q9UDW3 170 aaKnown RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 RPH3AQ9Y2J0 694 aaPredicted RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 ITGB1P05556 798 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 RGS19P49795 217 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 FOXO4P98177 505 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 SNX33Q8WV41 574 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 CBWD1Q9BRT8 395 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 BHLHE41Q9C0J9 482 aaPredicted RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 LHX5Q9H2C1 402 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 PCDH10Q9P2E7 1040 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 ACSL4O60488 711 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 AGAP7PQ5VUJ5 663 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 EPGNQ6UW88 154 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 RTL4Q6ZR62 310 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 SNX20Q7Z614 316 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 RBFAQ8N0V3 343 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 C12orf45Q8N5I9 185 aaPredicted RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 ZNF248Q8NDW4 579 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 PCDHB1Q9Y5F3 818 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 ISM1B1AKI9 464 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 TCF7P36402 384 aaPredicted RBP8.64□□□□□ -1.03
TTC28-208ENST00000612946 ARL4DP49703 201 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 IKBKEQ14164 716 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 MYLK3Q32MK0 819 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 ZDHHC12Q96GR4 267 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 ADAM2Q99965 735 aa8.64□□□□□ -1.03
TTC28-208ENST00000612946 C9IYK1 514 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PSMB4P28070 264 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ETV3P41162 512 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 LARS2Q15031 903 aaKnown RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 EPHA10Q5JZY3 1008 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ZNF512Q96ME7 567 aaPredicted RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 KCNH7Q9NS40 1196 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 CNTN6Q9UQ52 1028 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 HMX3A6NHT5 357 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 DPYSL4O14531 572 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 SLC37A4O43826 429 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 GBX2P52951 348 aaPredicted RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 ESCO2Q56NI9 601 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 LRIF1Q5T3J3 769 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 AGAP6Q5VW22 663 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 IRF2BP2Q7Z5L9 587 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 SLC41A1Q8IVJ1 513 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 CHFRQ96EP1 664 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 TMEM80Q96HE8 168 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 AGAP4Q96P64 663 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 NDC1Q9BTX1 674 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PCDHGA4Q9Y5G9 962 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 MIA3Q5JRA6 1907 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 A0A1W2PPW3 197 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 NME6O75414 186 aaPredicted RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 HLA-DQA2P01906 255 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 MPSTP25325 297 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 SMSP52788 366 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 BRSK2Q8IWQ3 736 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PLD6Q8N2A8 252 aaKnown RBP8.63□□□□□ -1.03
TTC28-208ENST00000612946 OR1J4Q8NGS1 313 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 SLC22A8Q8TCC7 542 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 DCAKDQ8WVC6 231 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 RNF157Q96PX1 679 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 SYT4Q9H2B2 425 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 NIPAL2Q9H841 368 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ADRA2BP18089 450 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 RAB8AP61006 207 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 C10orf120Q5SQS8 335 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 GALNT5Q7Z7M9 940 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 FAM35AQ86V20 835 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 RETREG3Q86VR2 466 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 CEP97Q8IW35 865 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PPM1MQ96MI6 270 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 PSKH2Q96QS6 385 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 ATP13A1Q9HD20 1204 aa8.63□□□□□ -1.03
TTC28-208ENST00000612946 TGFB3P10600 412 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms