RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ERCC2P18074 760 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 THOP1P52888 689 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 HNRNPKP61978 463 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 RPL36AP83881 106 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 PTPRCAPQ14761 206 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 TNIP1Q15025 636 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 VWC2Q2TAL6 325 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 ZNF672Q499Z4 452 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 ACCSLQ4AC99 568 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 KLHL26Q53HC5 615 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 MDH1BQ5I0G3 518 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 FAM198BQ6UWH4 519 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 GDPD4Q6W3E5 623 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 DGLUCYQ7Z3D6 616 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 SLFN11Q7Z7L1 901 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 COMMD2Q86X83 199 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 CEP57L1Q8IYX8 460 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 CPSF7Q8N684 471 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 PI4KAP1Q8N8J0 262 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 PPFIBP2Q8ND30 876 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 ATL1Q8WXF7 558 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 SCRN2Q96FV2 425 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 SFXN2Q96NB2 322 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 ZMAT2Q96NC0 199 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 BTBD10Q9BSF8 475 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 ZNF556Q9HAH1 456 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 UPF2Q9HAU5 1272 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 ACKR4Q9NPB9 350 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 TCF7L2Q9NQB0 619 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 OLFML3Q9NRN5 406 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 DONSONQ9NYP3 566 aa4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 TCF20Q9UGU0 1960 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-213ENST00000609587 A0A1W2PPM1 405 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 TMEM221A6NGB7 291 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 PRR32B1ATL7 298 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 TRIM77I1YAP6 450 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 GAS8-AS1O95177 125 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 CELF2O95319 508 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 CRYAAP02489 173 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 ZNF41P51814 821 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 COG2Q14746 738 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 ZNF718Q3SXZ3 478 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 ZNF771Q7L3S4 317 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 DET1Q7L5Y6 550 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 NFE4Q86UQ8 179 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 SLC4A11Q8NBS3 891 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 SLC24A4Q8NFF2 622 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 RNF128Q8TEB7 428 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 ZNF473Q8WTR7 871 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 NAA11Q9BSU3 229 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 TRAF4Q9BUZ4 470 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 ST6GALNAC4Q9H4F1 302 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 ZCCHC17Q9NP64 241 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 TAAR2Q9P1P5 351 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 TUBE1Q9UJT0 475 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 PADI2Q9Y2J8 665 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 JRKLQ9Y4A0 524 aa4.02□□□□□ -1.77
SMCHD1-213ENST00000609587 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 A0A1W2PRB8 838 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 CCER2I3L3R5 266 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 XPNPEP2O43895 674 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 KRT36O76013 467 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 C22orf31O95567 290 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 QDPRP09417 244 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 RAB40ALP0C0E4 278 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 MSH3P20585 1137 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 ACHEP22303 614 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 RBPJQ06330 500 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 PLA2G4FQ68DD2 849 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 GSG1LQ6UXU4 331 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 LINGO4Q6UY18 593 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 ZBTB49Q6ZSB9 765 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 MFN1Q8IWA4 741 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 CFAP206Q8IYR0 622 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 ARHGAP24Q8N264 748 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 Q8NFD4 153 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 ST6GAL2Q96JF0 529 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 SGK494Q96LW2 274 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 SLC25A23Q9BV35 468 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 VN1R1Q9GZP7 353 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 TFB2MQ9H5Q4 396 aaKnown RBP4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 ZBTB20Q9HC78 741 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 ANAPC5Q9UJX4 755 aa4.01□□□□□ -1.77
SMCHD1-213ENST00000609587 SERINC4A6NH21 518 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 TBCAO75347 108 aaKnown RBP4□□□□□ -1.77
SMCHD1-213ENST00000609587 RECQL5O94762 991 aaPredicted RBP4□□□□□ -1.77
SMCHD1-213ENST00000609587 HSPA4LO95757 839 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 NR3C1P04150 777 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 NR1D1P20393 614 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 EEF1B2P24534 225 aaKnown RBP4□□□□□ -1.77
SMCHD1-213ENST00000609587 MARK3P27448 753 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 EPHA2P29317 976 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 SLC6A6P31641 620 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 CCR10P46092 362 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 CX3CL1P78423 397 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 ACSM1Q08AH1 577 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 ARL16Q0P5N6 197 aa4□□□□□ -1.77
SMCHD1-213ENST00000609587 DMP1Q13316 513 aaPredicted RBP4□□□□□ -1.77
SMCHD1-213ENST00000609587 ZRSR1Q15695 479 aaKnown RBP4□□□□□ -1.77
SMCHD1-213ENST00000609587 SPECC1Q5M775 1068 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms