RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 NANOGP8Q6NSW7 305 aa14.96□□□□□ -0.01
AC009961.1-203ENST00000607836 HACD2Q6Y1H2 254 aa14.96□□□□□ -0.01
AC009961.1-203ENST00000607836 PARS2Q7L3T8 475 aaKnown RBP14.96□□□□□ -0.01
AC009961.1-203ENST00000607836 EFL1Q7Z2Z2 1120 aaKnown RBP14.96□□□□□ -0.01
AC009961.1-203ENST00000607836 TMEM125Q96AQ2 219 aa14.96□□□□□ -0.01
AC009961.1-203ENST00000607836 NANOGQ9H9S0 305 aa14.96□□□□□ -0.01
AC009961.1-203ENST00000607836 GID8Q9NWU2 228 aa14.96□□□□□ -0.01
AC009961.1-203ENST00000607836 CNOT6Q9ULM6 557 aaKnown RBP14.96□□□□□ -0.01
AC009961.1-203ENST00000607836 CCL27Q9Y4X3 112 aa14.96□□□□□ -0.01
AC009961.1-203ENST00000607836 PCDHA9Q9Y5H5 950 aa14.96□□□□□ -0.01
AC009961.1-203ENST00000607836 MAGEA13PA6NCF6 341 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 K7ESM1 405 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 TSPAN6O43657 245 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 SGTAO43765 313 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 C8BP07358 591 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 GSK3BP49841 420 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 LIPEQ05469 1076 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 PRKG2Q13237 762 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 NEK5Q6P3R8 708 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 BRAT1Q6PJG6 821 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 MINDY1Q8N5J2 469 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 GFM2Q969S9 779 aaKnown RBP14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 SLC29A1Q99808 456 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 HOPXQ9BPY8 73 aaPredicted RBP14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 COQ10BQ9H8M1 238 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 PRM3Q9NNZ6 103 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 ABCD2Q9UBJ2 740 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 TMCO1Q9UM00 188 aa14.96□□□□□ -0.02
AC009961.1-203ENST00000607836 PRAMEF4O60810 478 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 NELFEP18615 380 aaKnown RBP14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 MSH3P20585 1137 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 PRAMEF9Q5VWM5 478 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 SUSD1Q6UWL2 747 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 LIX1Q8N485 282 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 YIPF3Q9GZM5 350 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 ALG2Q9H553 416 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 UBAP1Q9NZ09 502 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 ALPK3Q96L96 1907 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 IGLV3-16A0A075B6K0 115 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 TCRBV3S1A0A5B6 114 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 ARPC2O15144 300 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 PDYNP01213 254 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 CISD3P0C7P0 127 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 ELFN1P0C7U0 828 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 PFKLP17858 780 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 NRIP1P48552 1158 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 PDK3Q15120 406 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 SF1Q15637 639 aaKnown RBP14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 FAM174BQ3ZCQ3 159 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 PDCD4Q53EL6 469 aaKnown RBP14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 FAM78AQ5JUQ0 283 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 OR52E8Q6IFG1 317 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 PSRC1Q6PGN9 363 aaPredicted RBP14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 ZFAND4Q86XD8 727 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 OR2T34Q8NGX1 318 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 OR2T3Q8NH03 318 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 ASB11Q8WXH4 323 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 IGFLR1Q9H665 355 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 ZDHHC7Q9NXF8 308 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 AP4B1Q9Y6B7 739 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 DOCK9Q9BZ29 2069 aa14.95□□□□□ -0.02
AC009961.1-203ENST00000607836 SAC3D1A6NKF1 404 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 PDLIM1O00151 329 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 MANBAO00462 879 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 PEX1O43933 1283 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 EEDO75530 441 aaKnown RBP14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 HIST1H2AGP0C0S8 130 aaPredicted RBP14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 HIST1H2ADP20671 130 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 PDHA2P29803 388 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 EMX2Q04743 252 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 ZNF805Q5CZA5 627 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 RASGEF1AQ8N9B8 481 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 AP2M1Q96CW1 435 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 HIST1H2AHQ96KK5 128 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 HIST1H2AJQ99878 128 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 KCTD14Q9BQ13 255 aaPredicted RBP14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 H2AFJQ9BTM1 129 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 PARVBQ9HBI1 364 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 LEF1Q9UJU2 399 aaPredicted RBP14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 FAM234BA2RU67 622 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 C7orf72A4D263 438 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 ANKRD28O15084 1053 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 LRATO95237 230 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 CYP2A6P11509 494 aaPredicted RBP14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 OR4D2P58180 307 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 TRAP1Q12931 704 aaKnown RBP14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 TSTA3Q13630 321 aaPredicted RBP14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 FNDC3BQ53EP0 1204 aaKnown RBP14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 SPANXN4Q5MJ08 99 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 TBCELQ5QJ74 424 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 HENMT1Q5T8I9 393 aaKnown RBP14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 LIPIQ6XZB0 460 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 GET4Q7L5D6 327 aaPredicted RBP14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 HERVK_113Q902F9 699 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 SEPHS2Q99611 448 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 ACPTQ9BZG2 426 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 SLC32A1Q9H598 525 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 MRPL40Q9NQ50 206 aaKnown RBP14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 PFDN4Q9NQP4 134 aa14.94□□□□□ -0.02
AC009961.1-203ENST00000607836 DLGAP4Q9Y2H0 992 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms