RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026		A0A0G2JNG1	304 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	SPAAR	A0A1B0GVQ0	90 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	SLC5A10	A0PJK1	596 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	EME2	A4GXA9	379 aa	Predicted RBP	21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	OR5K4	A6NMS3	321 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	KIR2DS3	K7RE56	304 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	GPC4	O75487	556 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	SLC35E2B	P0CK96	405 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	PYGB	P11216	843 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	ZNF37A	P17032	561 aa	Predicted RBP	21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	HAL	P42357	657 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	ACADVL	P49748	655 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	DUSP3	P51452	185 aa	Predicted RBP	21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	PGGT1B	P53609	377 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	PUM1	Q14671	1186 aa	Known RBP eCLIP	21.44	■■□□□ 1.02	1e-7	■□□□□ 9
LTBP4-227	ENST00000600026	KIR2DS5	Q14953	304 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	CLCA4	Q14CN2	919 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	HSP90B2P	Q58FF3	399 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	EFL1	Q7Z2Z2	1120 aa	Known RBP	21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	CPNE9	Q8IYJ1	553 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	RMDN2	Q96LZ7	410 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	SMC6	Q96SB8	1091 aa		21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	NOVA2	Q9UNW9	492 aa	Known RBP	21.44	■■□□□ 1.02
LTBP4-227	ENST00000600026	OR52A4P	A6NMU1	304 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	FOXO6	A8MYZ6	492 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	GOLGA8R	I6L899	631 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	SLC35G4	P0C7Q5	338 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	CCDC166	P0CW27	439 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	COL6A2	P12110	1019 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	KRT4	P19013	534 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	ACP1	P24666	158 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	PDHA2	P29803	388 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	CSRP3	P50461	194 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	TNFAIP8L3	Q5GJ75	292 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	PPM1J	Q5JR12	505 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	MYO1H	Q8N1T3	1032 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	IFI44	Q8TCB0	444 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	ARL8A	Q96BM9	186 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	ALKBH8	Q96BT7	664 aa	Known RBP	21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	LINGO1	Q96FE5	620 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	ATP6V1G3	Q96LB4	118 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	OR52A5	Q9H2C5	316 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	TOR4A	Q9NXH8	423 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	ZNF624	Q9P2J8	865 aa	Predicted RBP	21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	ACTL7B	Q9Y614	415 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	RNF215	Q9Y6U7	377 aa		21.43	■■□□□ 1.02
LTBP4-227	ENST00000600026	CPED1	A4D0V7	1026 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	SLCO2B1	O94956	709 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	WISP3	O95389	354 aa	Predicted RBP	21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	LTA4H	P09960	611 aa	Known RBP	21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	MPC1L	P0DKB6	136 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	KCNA4	P22459	653 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	CCNF	P41002	786 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	UBE2I	P63279	158 aa	Known RBP	21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	GBX1	Q14549	363 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	FAM83E	Q2M2I3	478 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	ACSBG2	Q5FVE4	666 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	PERM1	Q5SV97	790 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	CAPRIN2	Q6IMN6	1127 aa	Known RBP	21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	TMEM207	Q6UWW9	146 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	NEK10	Q6ZWH5	1172 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	SLC9B2	Q86UD5	537 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	LCA5	Q86VQ0	697 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	C4orf33	Q8N1A6	199 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	SPDYE1	Q8NFV5	336 aa	Predicted RBP	21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	OR6C4	Q8NGE1	309 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	EEF1AKMT1	Q8WVE0	214 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	NAT6	Q93015	286 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	CCDC74A	Q96AQ1	378 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	PDLIM5	Q96HC4	596 aa	Known RBP	21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	INSM2	Q96T92	566 aa	Predicted RBP	21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	CPNE7	Q9UBL6	633 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	DCDC2	Q9UHG0	476 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	CDYL	Q9Y232	598 aa		21.42	■■□□□ 1.02
LTBP4-227	ENST00000600026	HMGB1P1	B2RPK0	211 aa	Predicted RBP	21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	COPE	O14579	308 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	KLHL2	O95198	593 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	GSTA1	P08263	222 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	GLB1	P16278	677 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	SLC19A1	P41440	591 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	FASLG	P48023	281 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	CCT5	P48643	541 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	KPNA2	P52292	529 aa	Known RBP	21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	ATP6V0D1	P61421	351 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	SIM1	P81133	766 aa	Predicted RBP	21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	IRF9	Q00978	393 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	HHEX	Q03014	270 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	SLC18A2	Q05940	514 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	BIRC2	Q13490	618 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	CSHL1	Q14406	222 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	RPE65	Q16518	533 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	TSNAXIP1	Q2TAA8	658 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	DUS1L	Q6P1R4	473 aa	Known RBP	21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	KLC3	Q6P597	504 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	PDZD3	Q86UT5	571 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	EXOC3L1	Q86VI1	746 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	TRIM48	Q8IWZ4	208 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	SLC22A15	Q8IZD6	547 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	SKA2	Q8WVK7	121 aa	Predicted RBP	21.41	■■□□□ 1.02

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms